FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9886-RA through 18771 annotations produced 1 hits

(CG9886):

Annotation Number : CG9886
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031428
Gbrowse : chr2L:2420807-2422915 (+) // 100.0 //
Probeset : 1636932_at
Accessions : protein= NP_608684;, nucleotide= NM_134840;
Pathway : 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electr
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electro
FlyMine data for FBgn0031428.
BDGP gene expression has embryonic in situ data for CG9886: 4 pix of staining in 1 body parts.
VDRC has 4 RNAi stocks for FBgn0031428 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	77 ± 2	4 of 4	1.20	None
Head	137 ± 8	4 of 4	2.10	Up
Eye	72 ± 6	4 of 4	1.12	None
Thoracicoabdominal ganglion	64 ± 1	4 of 4	1.00	None
Salivary gland	57 ± 6	4 of 4	0.89	None
Crop	57 ± 1	4 of 4	0.90	None
Midgut	67 ± 1	4 of 4	1.00	None
Tubule	209 ± 8	4 of 4	3.20	Up
Hindgut	59 ± 4	4 of 4	0.90	None
Heart	388 ± 24	4 of 4	5.98	Up
Fat body	573 ± 23	4 of 4	8.82	Up
Ovary	15 ± 2	4 of 4	0.20	Down
Testis	14 ± 1	4 of 4	0.20	Down
Male accessory glands	88 ± 5	4 of 4	1.40	Up
Virgin spermatheca	449 ± 49	4 of 4	6.92	Up
Mated spermatheca	331 ± 16	4 of 4	5.11	Up
Adult carcass	279 ± 15	4 of 4	4.30	Up
Larval CNS	44 ± 5	4 of 4	0.69	Down
Larval Salivary gland	29 ± 4	4 of 4	0.46	Down
Larval midgut	77 ± 3	4 of 4	1.20	None
Larval tubule	159 ± 4	4 of 4	2.50	Up
Larval hindgut	42 ± 1	4 of 4	0.66	Down
Larval fat body	177 ± 16	4 of 4	2.70	Up
Larval trachea	48 ± 4	4 of 4	0.75	None
Larval carcass	61 ± 3	4 of 4	0.94	None
S2 cells (growing)	31 ± 1	4 of 4	0.48	Down
Whole fly	65 ± 5	4 of 4

Looking for CG9886-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720