FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9934-RA through 18771 annotations produced 1 hits

(CG9934):

Annotation Number : CG9934
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032467
Gbrowse : chr2L:13013258-13019434 (-) // 100.0 //
Probeset : 1635208_at
Accessions : protein= NP_001162967; /// NP_609597;, nucleotide= NM_001169496; /// NM_135753;
Pathway : 0000151 // ubiquitin ligase complex // inferred from electronic annotation
Interpro : 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // in
FlyMine data for FBgn0032467.
BDGP gene expression has embryonic in situ data for CG9934: 4 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0032467 available for purchase.
VDRC has 2 RNAi stocks for FBgn0032467 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	193 ± 5	4 of 4	0.90	None
Head	142 ± 5	4 of 4	0.70	Down
Eye	92 ± 3	4 of 4	0.45	Down
Thoracicoabdominal ganglion	184 ± 7	4 of 4	0.90	None
Salivary gland	137 ± 8	4 of 4	0.66	Down
Crop	167 ± 3	4 of 4	0.80	None
Midgut	125 ± 5	4 of 4	0.60	Down
Tubule	227 ± 7	4 of 4	1.10	Up
Hindgut	115 ± 2	4 of 4	0.60	Down
Heart	160 ± 14	4 of 4	0.78	None
Fat body	234 ± 9	4 of 4	1.13	None
Ovary	276 ± 6	4 of 4	1.30	Up
Testis	439 ± 15	4 of 4	2.10	Up
Male accessory glands	129 ± 4	4 of 4	0.60	Down
Virgin spermatheca	181 ± 7	4 of 4	0.88	None
Mated spermatheca	184 ± 10	4 of 4	0.89	None
Adult carcass	241 ± 9	4 of 4	1.20	None
Larval CNS	276 ± 10	4 of 4	1.34	Up
Larval Salivary gland	221 ± 7	4 of 4	1.07	None
Larval midgut	287 ± 43	4 of 4	1.39	None
Larval tubule	653 ± 26	4 of 4	3.20	Up
Larval hindgut	257 ± 25	4 of 4	1.24	None
Larval fat body	762 ± 78	4 of 4	3.70	Up
Larval trachea	99 ± 6	4 of 4	0.48	Down
Larval carcass	653 ± 213	4 of 4	3.16	None
S2 cells (growing)	161 ± 4	4 of 4	0.78	None
Whole fly	206 ± 16	4 of 4

Looking for CG9934-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720