FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9953-RA through 18771 annotations produced 1 hits

(CG9953):

Annotation Number : CG9953
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035726
Gbrowse : chr3L:6962710-6964766 (+) // 100.0 //
Probeset : 1635070_at
Accessions : protein= NP_648067;, nucleotide= NM_139810;
Interpro : 0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004185 // serine-type carboxypeptidase
FlyMine data for FBgn0035726.
BDGP gene expression has embryonic in situ data for CG9953: 28 pix of staining in 11 body parts.
VDRC has 1 RNAi stocks for FBgn0035726 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	416 ± 14	4 of 4	0.70	Down
Head	615 ± 51	4 of 4	1.00	None
Eye	1095 ± 19	4 of 4	1.85	Up
Thoracicoabdominal ganglion	493 ± 20	4 of 4	0.80	Down
Salivary gland	374 ± 16	4 of 4	0.63	Down
Crop	255 ± 3	4 of 4	0.40	Down
Midgut	637 ± 17	4 of 4	1.10	None
Tubule	548 ± 37	4 of 4	0.90	None
Hindgut	427 ± 8	4 of 4	0.70	Down
Heart	3314 ± 129	4 of 4	5.61	Up
Fat body	1435 ± 49	4 of 4	2.43	Up
Ovary	669 ± 9	4 of 4	1.10	None
Testis	203 ± 4	4 of 4	0.30	Down
Male accessory glands	377 ± 6	4 of 4	0.60	Down
Virgin spermatheca	1075 ± 34	4 of 4	1.82	Up
Mated spermatheca	637 ± 39	4 of 4	1.08	None
Adult carcass	1075 ± 52	4 of 4	1.80	Up
Larval CNS	623 ± 21	4 of 4	1.06	None
Larval Salivary gland	322 ± 9	4 of 4	0.54	Down
Larval midgut	1455 ± 84	4 of 4	2.46	Up
Larval tubule	1360 ± 40	4 of 4	2.30	Up
Larval hindgut	493 ± 37	4 of 4	0.84	None
Larval fat body	1433 ± 181	4 of 4	2.40	Up
Larval trachea	483 ± 22	4 of 4	0.82	Down
Larval carcass	744 ± 41	4 of 4	1.26	Up
S2 cells (growing)	957 ± 3	4 of 4	1.62	Up
Whole fly	591 ± 31	4 of 4

Looking for CG9953-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720