FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9962-RA through 18771 annotations produced 1 hits

CKIa-like (CG9962):

Annotation Number : CG9962
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031441
Gbrowse : chr2L:2646685-2647645 (-) // 100.0 //
Probeset : 1633699_at
Accessions : protein= NP_608697;, nucleotide= NM_134853;
Pathway : 0005737 // cytoplasm // inferred from direct assay
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0031441.
Homophila reports that CG9962 is a close match (3e-29) to human gene SCA11;TTBK2 (NP_775771), a gene associated with Spinocerebellar ataxia-11, 604432 (3).
VDRC has 4 RNAi stocks for FBgn0031441 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.20	None
Head	3 ± 1	0 of 4	0.40	None
Eye	2 ± 1	0 of 4	0.35	None
Thoracicoabdominal ganglion	2 ± 0	0 of 4	0.20	None
Salivary gland	5 ± 1	0 of 4	0.68	None
Crop	8 ± 3	0 of 4	1.00	None
Midgut	2 ± 1	0 of 4	0.30	None
Tubule	4 ± 0	0 of 4	0.50	Down
Hindgut	3 ± 1	0 of 4	0.40	None
Heart	0 ± 0	0 of 4	0.09	None
Fat body	2 ± 2	0 of 4	0.34	None
Ovary	0 ± 0	0 of 4	0.10	None
Testis	107 ± 4	4 of 4	12.70	Up
Male accessory glands	3 ± 1	0 of 4	0.40	None
Virgin spermatheca	1 ± 0	0 of 4	0.13	None
Mated spermatheca	2 ± 0	0 of 4	0.30	None
Adult carcass	7 ± 1	0 of 4	0.90	None
Larval CNS	1 ± 1	0 of 4	0.17	None
Larval Salivary gland	1 ± 0	0 of 4	0.12	None
Larval midgut	6 ± 2	0 of 4	0.72	None
Larval tubule	1 ± 0	0 of 4	0.20	None
Larval hindgut	1 ± 0	0 of 4	0.20	None
Larval fat body	28 ± 6	2 of 4	3.40	Up
Larval trachea	1 ± 0	0 of 4	0.13	None
Larval carcass	1 ± 0	0 of 4	0.22	None
S2 cells (growing)	1 ± 0	0 of 4	0.12	None
Whole fly	8 ± 2	0 of 4

Looking for CG9962-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720