FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9989-RA through 18771 annotations produced 1 hits

(CG9989):

Annotation Number : CG9989
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039593
Gbrowse : chr3R:24496457-24497743 (+) // 100.0 //
Probeset : 1634674_at
Accessions : protein= NP_651627;, nucleotide= NM_143370;
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from p
FlyMine data for FBgn0039593.
BDGP gene expression has embryonic in situ data for CG9989: 17 pix of staining in 3 body parts.
VDRC has 1 RNAi stocks for FBgn0039593 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 0	0 of 4	0.10	Down
Head	121 ± 18	4 of 4	4.00	Up
Eye	85 ± 41	4 of 4	2.81	None
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.10	Down
Salivary gland	6 ± 3	0 of 4	0.23	Down
Crop	5 ± 2	0 of 4	0.20	Down
Midgut	70 ± 3	4 of 4	2.30	Up
Tubule	77 ± 10	4 of 4	2.50	Up
Hindgut	23 ± 1	2 of 4	0.80	None
Heart	77 ± 12	4 of 4	2.54	Up
Fat body	196 ± 39	4 of 4	6.41	Up
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	0 ± 0	0 of 4	0.00	Down
Male accessory glands	7 ± 2	0 of 4	0.20	Down
Virgin spermatheca	471 ± 71	4 of 4	15.40	Up
Mated spermatheca	234 ± 63	4 of 4	7.67	Up
Adult carcass	88 ± 17	4 of 4	2.90	Up
Larval CNS	0 ± 0	0 of 4	0.02	Down
Larval Salivary gland	9 ± 4	0 of 4	0.31	Down
Larval midgut	48 ± 15	1 of 4	1.58	None
Larval tubule	35 ± 5	3 of 4	1.10	None
Larval hindgut	51 ± 10	3 of 4	1.67	None
Larval fat body	4237 ± 460	4 of 4	138.50	Up
Larval trachea	6 ± 2	0 of 4	0.21	Down
Larval carcass	61 ± 18	4 of 4	2.02	None
S2 cells (growing)	63 ± 7	4 of 4	2.08	Up
Whole fly	30 ± 5	3 of 4

Looking for CG9989-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720