Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CR_TC_GM10489 through 18771 annotations produced 1 hits



(CG34261):

Annotation Number : CR_tc_GM10489
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085290
Gbrowse : chr3L:21189946-21190840 (+) // 100.0 //
Probeset : 1633297_at
Accessions : protein= NP_001097655; /// NP_001097656;, nucleotide= NM_001104185; /// NM_001104186;
FlyMine data for FBgn0085290.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain15 04 of 4 0.20Down
Head8 13 of 4 0.10Down
Eye16 04 of 4 0.26Down
Thoracicoabdominal ganglion24 14 of 4 0.40Down
Salivary gland12 20 of 4 0.20Down
Crop6 12 of 4 0.10Down
Midgut9 10 of 4 0.10Down
Tubule12 12 of 4 0.20Down
Hindgut12 14 of 4 0.20Down
Heart19 14 of 4 0.30Down
Fat body14 44 of 4 0.22Down
Ovary159 54 of 4 2.50Up
Testis30 14 of 4 0.50Down
Male accessory glands9 21 of 4 0.10Down
Virgin spermatheca29 24 of 4 0.45Down
Mated spermatheca29 24 of 4 0.46Down
Adult carcass7 31 of 4 0.10Down
Larval CNS91 64 of 4 1.42Up
Larval Salivary gland16 34 of 4 0.25Down
Larval midgut13 14 of 4 0.21Down
Larval tubule16 04 of 4 0.30Down
Larval hindgut17 14 of 4 0.27Down
Larval fat body16 23 of 4 0.30Down
Larval trachea31 44 of 4 0.48Down
Larval carcass17 24 of 4 0.27Down
S2 cells (growing)43 14 of 4 0.68Down
Whole fly64 54 of 4

Looking for CR_tc_GM10489. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime