Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CT35159 through 18771 annotations produced 1 hits



inaF-A (inaF-A):

Annotation Number : CT35159
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085351
Gbrowse : chrX:11627657-11627927 (-) // 100.0 //
Probeset : 1638622_at
Accessions : protein= NP_001096960;, nucleotide= NM_001103490;
Pathway : 0016020 // membrane // inferred from sequence or structural similarity
Interpro : 0005246 // calcium channel regulator activity // inferred from genetic interaction /// 0005515 // protein binding // inf
FlyMine data for FBgn0085351.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain12 ± 10 of 4 3.80Up
Head7 ± 10 of 4 2.20None
Eye1 ± 00 of 4 0.52None
Thoracicoabdominal ganglion7 ± 20 of 4 2.10None
Salivary gland25 ± 50 of 4 7.52Up
Crop12 ± 22 of 4 3.70Up
Midgut9 ± 20 of 4 2.80None
Tubule3 ± 00 of 4 1.00None
Hindgut10 ± 30 of 4 3.00None
Heart2 ± 00 of 4 0.68None
Fat body10 ± 60 of 4 3.00None
Ovary6 ± 10 of 4 1.90None
Testis1 ± 00 of 4 0.30None
Male accessory glands10 ± 30 of 4 3.00None
Virgin spermatheca10 ± 10 of 4 3.00Up
Mated spermatheca7 ± 10 of 4 2.24None
Adult carcass15 ± 30 of 4 4.60Up
Larval CNS7 ± 20 of 4 2.08None
Larval Salivary gland2 ± 00 of 4 0.82None
Larval midgut3 ± 10 of 4 1.04None
Larval tubule5 ± 10 of 4 1.50None
Larval hindgut6 ± 20 of 4 1.99None
Larval fat body4 ± 20 of 4 1.40None
Larval trachea3 ± 30 of 4 1.01None
Larval carcass4 ± 10 of 4 1.29None
S2 cells (growing)2 ± 00 of 4 0.74None
Whole fly3 ± 10 of 4

Looking for CT35159. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime