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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CT36309 through 18771 annotations produced 1 hits



dpr8 (dpr8):

Annotation Number : CT36309
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052600
Gbrowse : chrX:14215821-14216937 (+) // 100.0 //
Probeset : 1623137_s_at
Accessions : protein= NP_727781;, nucleotide= NM_167408;
FlyMine data for FBgn0052600.
TRiP has 1 RNAi stocks for FBgn0052600 available for purchase.
VDRC has 4 RNAi stocks for FBgn0052600 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain79 ± 44 of 416.40Up
Head10 ± 22 of 4 2.10None
Eye25 ± 44 of 4 5.13Up
Thoracicoabdominal ganglion27 ± 34 of 4 5.60Up
Salivary gland20 ± 51 of 4 4.20None
Crop7 ± 10 of 4 1.60None
Midgut6 ± 03 of 4 1.30None
Tubule5 ± 00 of 4 1.20Up
Hindgut7 ± 12 of 4 1.50None
Heart3 ± 00 of 4 0.66None
Fat body6 ± 10 of 4 1.27None
Ovary4 ± 12 of 4 0.90None
Testis1 ± 00 of 4 0.30Down
Male accessory glands4 ± 30 of 4 1.00None
Virgin spermatheca7 ± 00 of 4 1.47Up
Mated spermatheca7 ± 10 of 4 1.46None
Adult carcass7 ± 30 of 4 1.60None
Larval CNS14 ± 34 of 4 2.88Up
Larval Salivary gland9 ± 10 of 4 1.91Up
Larval midgut3 ± 10 of 4 0.69None
Larval tubule6 ± 22 of 4 1.40None
Larval hindgut7 ± 03 of 4 1.43None
Larval fat body5 ± 10 of 4 1.20None
Larval trachea5 ± 22 of 4 1.13None
Larval carcass6 ± 00 of 4 1.27None
S2 cells (growing)4 ± 00 of 4 0.83None
Whole fly4 ± 01 of 4

Looking for CT36309. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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