FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0000053 through 18771 annotations produced 2 hits

Complementation group D (ade3):

Annotation Number : CG31628
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000053
Gbrowse : chr2L:7014860-7023940 (-) // 100.0 //
Probeset : 1637037_at
Accessions : protein= NP_001014477; /// NP_523497;, nucleotide= NM_001014477; /// NM_078773;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from
FlyMine data for FBgn0000053.
VDRC has 2 RNAi stocks for FBgn0000053 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	29 ± 2	4 of 4	0.20	Down
Head	294 ± 6	4 of 4	2.10	Up
Eye	115 ± 18	4 of 4	0.83	None
Thoracicoabdominal ganglion	36 ± 2	3 of 4	0.30	Down
Salivary gland	67 ± 5	3 of 4	0.49	Down
Crop	100 ± 1	4 of 4	0.70	Down
Midgut	30 ± 2	3 of 4	0.20	Down
Tubule	55 ± 3	3 of 4	0.40	Down
Hindgut	93 ± 3	4 of 4	0.70	Down
Heart	174 ± 11	4 of 4	1.25	Up
Fat body	386 ± 56	4 of 4	2.77	Up
Ovary	123 ± 1	4 of 4	0.90	None
Testis	16 ± 1	3 of 4	0.10	Down
Male accessory glands	10 ± 4	0 of 4	0.10	Down
Virgin spermatheca	1430 ± 106	4 of 4	10.24	Up
Mated spermatheca	539 ± 71	4 of 4	3.86	Up
Adult carcass	301 ± 11	4 of 4	2.20	Up
Larval CNS	140 ± 17	4 of 4	1.01	None
Larval Salivary gland	106 ± 12	4 of 4	0.76	None
Larval midgut	47 ± 6	4 of 4	0.34	Down
Larval tubule	114 ± 9	4 of 4	0.80	None
Larval hindgut	53 ± 2	4 of 4	0.38	Down
Larval fat body	3859 ± 345	4 of 4	27.60	Up
Larval trachea	79 ± 4	4 of 4	0.57	Down
Larval carcass	67 ± 7	4 of 4	0.48	Down
S2 cells (growing)	148 ± 8	4 of 4	1.06	None
Whole fly	139 ± 6	4 of 4

Complementation group D /// (ade3 /// CG31908):

Annotation Number : CG31908
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051908
Gbrowse : chr2L:7024828-7027295 (-) // 100.0 //
Probeset : 1623422_a_at
Accessions : protein= NP_723239; /// NP_723240;, nucleotide= NM_164726; /// NM_164727;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation
Interpro : 0004637 // phosphoribosylamine-glycine ligase activity // non-traceable author statement /// 0004637 // phosphoribosylam
FlyMine data for FBgn0051908.
BDGP gene expression has embryonic in situ data for CG31908: 4 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0051908 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	208 ± 2	4 of 4	0.70	Down
Head	231 ± 9	4 of 4	0.80	Down
Eye	237 ± 9	4 of 4	0.81	Down
Thoracicoabdominal ganglion	206 ± 5	4 of 4	0.70	Down
Salivary gland	470 ± 3	4 of 4	1.60	Up
Crop	376 ± 8	4 of 4	1.30	Up
Midgut	274 ± 9	4 of 4	0.90	None
Tubule	480 ± 10	4 of 4	1.60	Up
Hindgut	307 ± 4	4 of 4	1.00	None
Heart	296 ± 10	4 of 4	1.01	None
Fat body	283 ± 45	4 of 4	0.97	None
Ovary	381 ± 7	4 of 4	1.30	Up
Testis	256 ± 4	4 of 4	0.90	Down
Male accessory glands	308 ± 25	4 of 4	1.10	None
Virgin spermatheca	599 ± 16	4 of 4	2.04	Up
Mated spermatheca	578 ± 41	4 of 4	1.97	Up
Adult carcass	246 ± 8	4 of 4	0.80	Down
Larval CNS	390 ± 15	4 of 4	1.33	Up
Larval Salivary gland	355 ± 15	4 of 4	1.21	Up
Larval midgut	251 ± 10	4 of 4	0.86	Down
Larval tubule	431 ± 5	4 of 4	1.50	Up
Larval hindgut	295 ± 12	4 of 4	1.01	None
Larval fat body	554 ± 55	4 of 4	1.90	Up
Larval trachea	501 ± 30	4 of 4	1.71	Up
Larval carcass	344 ± 12	4 of 4	1.17	Up
S2 cells (growing)	386 ± 3	4 of 4	1.32	Up
Whole fly	293 ± 9	4 of 4

Looking for FBgn0000053. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720