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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0000057 through 18771 annotations produced 1 hits



adipose (adp):

Annotation Number : CG5124
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000057
Gbrowse : chr2R:14039208-14041351 (+) // 100.0 //
Probeset : 1624637_at
Accessions : protein= NP_611296;, nucleotide= NM_137452;
Interpro : 0005488 // binding // inferred from electronic annotation
FlyMine data for FBgn0000057.
VDRC has 2 RNAi stocks for FBgn0000057 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain104 ± 44 of 4 1.00None
Head94 ± 54 of 4 0.90None
Eye87 ± 24 of 4 0.82Down
Thoracicoabdominal ganglion97 ± 54 of 4 0.90None
Salivary gland151 ± 104 of 4 1.42Up
Crop85 ± 44 of 4 0.80Down
Midgut56 ± 24 of 4 0.50Down
Tubule104 ± 44 of 4 1.00None
Hindgut74 ± 34 of 4 0.70Down
Heart86 ± 44 of 4 0.81Down
Fat body146 ± 224 of 4 1.38Up
Ovary111 ± 34 of 4 1.00None
Testis193 ± 24 of 4 1.80Up
Male accessory glands115 ± 74 of 4 1.10None
Virgin spermatheca109 ± 74 of 4 1.02None
Mated spermatheca111 ± 54 of 4 1.04None
Adult carcass115 ± 44 of 4 1.10None
Larval CNS59 ± 24 of 4 0.56Down
Larval Salivary gland82 ± 34 of 4 0.77Down
Larval midgut36 ± 14 of 4 0.34Down
Larval tubule151 ± 74 of 4 1.40Up
Larval hindgut58 ± 34 of 4 0.55Down
Larval fat body382 ± 144 of 4 3.60Up
Larval trachea79 ± 54 of 4 0.75Down
Larval carcass60 ± 24 of 4 0.57Down
S2 cells (growing)115 ± 44 of 4 1.09None
Whole fly106 ± 44 of 4

Looking for FBgn0000057. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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