FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0000077 through 18771 annotations produced 1 hits

almondex (amx):

Annotation Number : CG12127
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000077
Gbrowse : chrX:9139943-9141369 (-) // 100.0 //
Probeset : 1629036_at
Accessions : protein= NP_524644;, nucleotide= NM_079905;
Pathway : 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from e
FlyMine data for FBgn0000077.
VDRC has 2 RNAi stocks for FBgn0000077 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	99 ± 7	4 of 4	1.30	None
Head	83 ± 3	4 of 4	1.10	None
Eye	40 ± 1	4 of 4	0.54	Down
Thoracicoabdominal ganglion	90 ± 6	4 of 4	1.20	None
Salivary gland	88 ± 5	4 of 4	1.16	None
Crop	72 ± 3	4 of 4	1.00	None
Midgut	78 ± 2	4 of 4	1.00	None
Tubule	87 ± 3	4 of 4	1.10	Up
Hindgut	65 ± 5	4 of 4	0.90	None
Heart	68 ± 1	4 of 4	0.90	Down
Fat body	80 ± 9	4 of 4	1.06	None
Ovary	142 ± 1	4 of 4	1.90	Up
Testis	8 ± 0	1 of 4	0.10	Down
Male accessory glands	90 ± 3	4 of 4	1.20	Up
Virgin spermatheca	96 ± 4	4 of 4	1.27	Up
Mated spermatheca	104 ± 4	4 of 4	1.38	Up
Adult carcass	72 ± 2	4 of 4	1.00	None
Larval CNS	45 ± 4	4 of 4	0.59	Down
Larval Salivary gland	57 ± 1	4 of 4	0.76	Down
Larval midgut	70 ± 1	4 of 4	0.93	None
Larval tubule	95 ± 3	4 of 4	1.30	Up
Larval hindgut	58 ± 1	4 of 4	0.78	Down
Larval fat body	77 ± 10	4 of 4	1.00	None
Larval trachea	49 ± 7	4 of 4	0.65	Down
Larval carcass	40 ± 1	4 of 4	0.54	Down
S2 cells (growing)	91 ± 4	4 of 4	1.20	Up
Whole fly	75 ± 1	4 of 4

Looking for FBgn0000077. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720