FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0000241 through 18771 annotations produced 2 hits

Plum (bw):

Annotation Number : CG17632
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000241
Gbrowse : chr2R:19415327-19426016 (-) // 100.0 //
Probeset : 1629540_a_at
Accessions : protein= NP_523824; /// NP_995928;, nucleotide= NM_079100; /// NM_206206;
Pathway : 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electr
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0005395 // eye pigment precursor transporter a
FlyMine data for FBgn0000241.
BDGP gene expression has embryonic in situ data for bw: 17 pix of staining in 7 body parts.
Homophila reports that CG17632 is a close match (8e-14) to human gene ABCA3;ABC3;SMDP3 (NP_001080), a gene associated with Surfactant metabolism dysfunction, pulmonary, 3, 610921 (3).
BioGrid reports that CG17632 interacts with CG2759 .
VDRC has 3 RNAi stocks for FBgn0000241 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	7 ± 0	4 of 4	0.50	Down
Head	87 ± 1	4 of 4	6.30	Up
Eye	366 ± 27	4 of 4	26.34	Up
Thoracicoabdominal ganglion	5 ± 1	1 of 4	0.40	Down
Salivary gland	11 ± 3	0 of 4	0.81	None
Crop	10 ± 2	0 of 4	0.70	None
Midgut	12 ± 1	0 of 4	0.90	None
Tubule	161 ± 60	4 of 4	11.60	Up
Hindgut	8 ± 0	0 of 4	0.60	Down
Heart	7 ± 0	2 of 4	0.54	Down
Fat body	13 ± 4	4 of 4	0.97	None
Ovary	11 ± 1	4 of 4	0.80	None
Testis	7 ± 1	3 of 4	0.50	Down
Male accessory glands	7 ± 2	2 of 4	0.60	None
Virgin spermatheca	12 ± 0	4 of 4	0.92	None
Mated spermatheca	11 ± 1	4 of 4	0.84	None
Adult carcass	10 ± 2	1 of 4	0.80	None
Larval CNS	11 ± 4	4 of 4	0.84	None
Larval Salivary gland	16 ± 0	0 of 4	1.17	None
Larval midgut	28 ± 5	4 of 4	2.06	None
Larval tubule	1996 ± 173	4 of 4	143.40	Up
Larval hindgut	14 ± 2	1 of 4	1.00	None
Larval fat body	150 ± 17	4 of 4	10.80	Up
Larval trachea	11 ± 9	2 of 4	0.86	None
Larval carcass	12 ± 1	3 of 4	0.87	None
S2 cells (growing)	7 ± 1	3 of 4	0.55	Down
Whole fly	13 ± 1	3 of 4

Plum (bw):

Annotation Number : CG17632
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000241
Gbrowse : chr2R:19424614-19426008 (-) // 100.0 //
Probeset : 1628293_a_at
Accessions : protein= NP_523824; /// NP_995928;, nucleotide= NM_079100; /// NM_206206;
Pathway : 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electr
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0005395 // eye pigment precursor transporter a
FlyMine data for FBgn0000241.
BDGP gene expression has embryonic in situ data for bw: 17 pix of staining in 7 body parts.
Homophila reports that CG17632 is a close match (8e-14) to human gene ABCA3;ABC3;SMDP3 (NP_001080), a gene associated with Surfactant metabolism dysfunction, pulmonary, 3, 610921 (3).
BioGrid reports that CG17632 interacts with CG2759 .
VDRC has 3 RNAi stocks for FBgn0000241 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.40	None
Head	17 ± 2	0 of 4	5.50	Up
Eye	25 ± 3	3 of 4	8.29	Up
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.30	None
Salivary gland	1 ± 0	0 of 4	0.52	None
Crop	1 ± 0	0 of 4	0.30	None
Midgut	1 ± 0	0 of 4	0.50	None
Tubule	3 ± 1	0 of 4	1.20	None
Hindgut	1 ± 0	0 of 4	0.40	None
Heart	1 ± 0	0 of 4	0.48	None
Fat body	1 ± 0	0 of 4	0.50	None
Ovary	0 ± 0	0 of 4	0.20	None
Testis	1 ± 1	0 of 4	0.60	None
Male accessory glands	3 ± 1	0 of 4	1.20	None
Virgin spermatheca	1 ± 0	0 of 4	0.34	None
Mated spermatheca	0 ± 0	0 of 4	0.27	None
Adult carcass	1 ± 0	0 of 4	0.60	None
Larval CNS	1 ± 0	0 of 4	0.35	None
Larval Salivary gland	1 ± 0	0 of 4	0.43	None
Larval midgut	3 ± 1	0 of 4	1.03	None
Larval tubule	531 ± 48	4 of 4	171.30	Up
Larval hindgut	1 ± 0	0 of 4	0.31	None
Larval fat body	34 ± 6	3 of 4	11.00	Up
Larval trachea	1 ± 1	0 of 4	0.60	None
Larval carcass	1 ± 0	0 of 4	0.42	None
S2 cells (growing)	1 ± 0	0 of 4	0.46	None
Whole fly	3 ± 1	0 of 4

Looking for FBgn0000241. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720