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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0000244 through 18771 annotations produced 1 hits



tensin (by):

Annotation Number : CR_tc_RE65113
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000244
Gbrowse : chr3R:5354057-5355401 (-) // 100.0 //
Probeset : 1630457_s_at
Accessions : protein= NP_001163569; /// NP_001163570; /// NP_649901;, nucleotide= NM_001170098; /// NM_001170099; /// NM_141644;
Pathway : 0005925 // focal adhesion // inferred from sequence or structural similarity
Interpro : 0003779 // actin binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred f
FlyMine data for FBgn0000244.
TRiP has 1 RNAi stocks for FBgn0000244 available for purchase.
VDRC has 1 RNAi stocks for FBgn0000244 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain80 14 of 4 0.70Down
Head205 74 of 4 1.90Up
Eye135 124 of 4 1.23None
Thoracicoabdominal ganglion110 14 of 4 1.00None
Salivary gland629 164 of 4 5.70Up
Crop563 204 of 4 5.10Up
Midgut200 54 of 4 1.80Up
Tubule334 164 of 4 3.00Up
Hindgut408 54 of 4 3.70Up
Heart202 164 of 4 1.83Up
Fat body165 144 of 4 1.50Up
Ovary39 14 of 4 0.40Down
Testis28 34 of 4 0.30Down
Male accessory glands294 204 of 4 2.70Up
Virgin spermatheca138 14 of 4 1.25Up
Mated spermatheca142 124 of 4 1.29None
Adult carcass209 134 of 4 1.90Up
Larval CNS54 54 of 4 0.50Down
Larval Salivary gland193 204 of 4 1.76Up
Larval midgut139 94 of 4 1.26Up
Larval tubule57 24 of 4 0.50Down
Larval hindgut271 204 of 4 2.46Up
Larval fat body53 74 of 4 0.50Down
Larval trachea236 824 of 4 2.14None
Larval carcass251 224 of 4 2.27Up
S2 cells (growing)52 24 of 4 0.48Down
Whole fly110 54 of 4

Looking for FBgn0000244. 1 entries matched from 18771, in 3 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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