Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0000281 through 18771 annotations produced 1 hits



():

Annotation Number : CG32924
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000281
Gbrowse : chr3R:26038624-26038864 (+) // 100.0 //
Probeset : 1624323_at
Accessions : protein= , nucleotide=
FlyMine data for FBgn0000281.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 1.00None
Head0 ± 00 of 4 0.40None
Eye1 ± 10 of 4 0.78None
Thoracicoabdominal ganglion1 ± 00 of 4 0.40None
Salivary gland2 ± 10 of 4 0.88None
Crop1 ± 10 of 4 0.70None
Midgut1 ± 00 of 4 0.50None
Tubule1 ± 00 of 4 0.40Down
Hindgut0 ± 00 of 4 0.40None
Heart1 ± 00 of 4 0.80None
Fat body1 ± 10 of 4 0.70None
Ovary0 ± 00 of 4 0.30None
Testis0 ± 00 of 4 0.30None
Male accessory glands1 ± 00 of 4 0.50None
Virgin spermatheca2 ± 10 of 4 0.84None
Mated spermatheca0 ± 00 of 4 0.30None
Adult carcass0 ± 00 of 4 0.30None
Larval CNS0 ± 00 of 4 0.28None
Larval Salivary gland3 ± 10 of 4 1.43None
Larval midgut2 ± 10 of 4 0.87None
Larval tubule0 ± 00 of 4 0.20None
Larval hindgut1 ± 00 of 4 0.39None
Larval fat body3 ± 00 of 4 1.30None
Larval trachea1 ± 20 of 4 0.67None
Larval carcass0 ± 00 of 4 0.33None
S2 cells (growing)4 ± 10 of 4 2.01None
Whole fly2 ± 10 of 4

Looking for FBgn0000281. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime