FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0000319 through 18771 annotations produced 1 hits

clathrin (Chc):

Annotation Number : CG9012
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000319
Gbrowse : chrX:15722018-15729507 (-) // 100.0 //
Probeset : 1639985_s_at
Accessions : protein= NP_001096993; /// NP_001096994; /// NP_477042; /// NP_727901; /// NP_996451; /// NP_996452;, nucleotide= NM_001103523; /// NM_001103524; /// NM_057694; /// NM_167466; /// NM_206728; /// NM_206729;
Pathway : open tracheal system // inferred from mutant phenotype /// 0035159 // regulation of tube length
Interpro : open tracheal system // inferred from mutant phenotype"
FlyMine data for FBgn0000319.
BioGrid reports that CG9012 interacts with CG1945 CG8532 CG4889 .
TRiP has 2 RNAi stocks for FBgn0000319 available for purchase.
VDRC has 3 RNAi stocks for FBgn0000319 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1059 ± 16	4 of 4	1.50	Up
Head	812 ± 23	4 of 4	1.20	Up
Eye	892 ± 34	4 of 4	1.26	Up
Thoracicoabdominal ganglion	1224 ± 43	4 of 4	1.70	Up
Salivary gland	1220 ± 40	4 of 4	1.73	Up
Crop	1013 ± 23	4 of 4	1.40	Up
Midgut	945 ± 24	4 of 4	1.30	Up
Tubule	1954 ± 48	4 of 4	2.80	Up
Hindgut	1404 ± 22	4 of 4	2.00	Up
Heart	1984 ± 56	4 of 4	2.81	Up
Fat body	840 ± 79	4 of 4	1.19	Up
Ovary	861 ± 35	4 of 4	1.20	Up
Testis	276 ± 9	4 of 4	0.40	Down
Male accessory glands	940 ± 16	4 of 4	1.30	Up
Virgin spermatheca	1315 ± 47	4 of 4	1.86	Up
Mated spermatheca	1314 ± 29	4 of 4	1.86	Up
Adult carcass	782 ± 27	4 of 4	1.10	None
Larval CNS	1029 ± 30	4 of 4	1.46	Up
Larval Salivary gland	2824 ± 39	4 of 4	4.00	Up
Larval midgut	1324 ± 11	4 of 4	1.88	Up
Larval tubule	1818 ± 8	4 of 4	2.60	Up
Larval hindgut	1425 ± 24	4 of 4	2.02	Up
Larval fat body	1196 ± 94	4 of 4	1.70	Up
Larval trachea	1332 ± 103	4 of 4	1.89	Up
Larval carcass	1146 ± 42	4 of 4	1.62	Up
S2 cells (growing)	1746 ± 41	4 of 4	2.47	Up
Whole fly	706 ± 14	4 of 4

Looking for FBgn0000319. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720