FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0000413 through 18771 annotations produced 1 hits

chr2L:10388077-10392786 (+) // 100.0 // (Daughterless):

Annotation Number : CG5102
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1625386_at
Accessions : protein= , nucleotide= NP_477189;
Pathway : "0006350 // transcription // inferred from electronic annotation /// 0006355 // regulation of transcription
Interpro : DNA-dependent // inferred from sequence or structural similarity /// 0006974 // response to DNA damage stimulus // infe
FlyMine data for full length.
Homophila reports that CG5102 is a close match (3e-28) to human gene ITF2;PTHS;SEF2;TCF4 (NP_003190), a gene associated with Pitt-Hopkins syndrome, 610954 (3).
BioGrid reports that CG5102 interacts with CG5703 CG6913 CG6945 CG8934 CG11579 CG4934 CG8365 CG10079 CG1429 CG3936 CG3936 CG3936 CG10393 CG10393 CG10393 CG8704 CG3839 CG3839 CG3839 CG3839 CG10250 CG2956 CG4889 CG4889 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	466 ± 2	4 of 4	1.30	Up
Head	278 ± 7	4 of 4	0.80	Down
Eye	369 ± 9	4 of 4	1.01	None
Thoracicoabdominal ganglion	354 ± 6	4 of 4	1.00	None
Salivary gland	363 ± 17	4 of 4	0.99	None
Crop	367 ± 10	4 of 4	1.00	None
Midgut	283 ± 5	4 of 4	0.80	Down
Tubule	215 ± 10	4 of 4	0.60	Down
Hindgut	272 ± 3	4 of 4	0.70	Down
Heart	256 ± 11	4 of 4	0.70	Down
Fat body	234 ± 28	4 of 4	0.64	Down
Ovary	754 ± 5	4 of 4	2.10	Up
Testis	233 ± 4	4 of 4	0.60	Down
Male accessory glands	380 ± 10	4 of 4	1.00	None
Virgin spermatheca	387 ± 11	4 of 4	1.06	None
Mated spermatheca	490 ± 2	4 of 4	1.34	Up
Adult carcass	211 ± 13	4 of 4	0.60	Down
Larval CNS	480 ± 17	4 of 4	1.31	Up
Larval Salivary gland	391 ± 30	4 of 4	1.07	None
Larval midgut	322 ± 10	4 of 4	0.88	None
Larval tubule	288 ± 12	4 of 4	0.80	Down
Larval hindgut	330 ± 11	4 of 4	0.90	None
Larval fat body	301 ± 13	4 of 4	0.80	Down
Larval trachea	400 ± 18	4 of 4	1.09	None
Larval carcass	332 ± 22	4 of 4	0.91	None
S2 cells (growing)	471 ± 10	4 of 4	1.29	Up
Whole fly	366 ± 19	4 of 4

Looking for FBgn0000413. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720