FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0000547 through 18771 annotations produced 1 hits

echinoid (ed):

Annotation Number : CG12676
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000547
Gbrowse : chr2L:4031378-4115059 (+) // 100.0 //
Probeset : 1627506_at
Accessions : protein= NP_523469;, nucleotide= NM_078745;
Pathway : 0005886 // plasma membrane // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from dir
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0000547.
BDGP gene expression has embryonic in situ data for ed: 32 pix of staining in 23 body parts.
Homophila reports that CG12676 is a close match (3e-11) to human gene FGFR1;FLT2;KAL2 (NP_075594), a gene associated with Jackson-Weiss syndrome, 123150 (3);Kallmann syndrome 2, 147950 (3);Pfeiffer syndrome, 101600 (3).
BioGrid reports that CG12676 interacts with CG13467 CG15803 CG15525 CG6416 CG7809 CG3166 CG10079 CG1634 CG1634 CG9375 CG9375 CG4531 CG12283 CG17077 CG1004 CG12559 CG9949 CG1921 CG1921 CG31774 .
TRiP has 2 RNAi stocks for FBgn0000547 available for purchase.
VDRC has 5 RNAi stocks for FBgn0000547 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	36 ± 3	4 of 4	0.80	Down
Head	34 ± 4	4 of 4	0.80	None
Eye	45 ± 6	4 of 4	1.00	None
Thoracicoabdominal ganglion	21 ± 1	4 of 4	0.50	Down
Salivary gland	45 ± 8	3 of 4	1.01	None
Crop	184 ± 9	4 of 4	4.10	Up
Midgut	9 ± 1	0 of 4	0.20	Down
Tubule	13 ± 0	2 of 4	0.30	Down
Hindgut	39 ± 3	4 of 4	0.90	None
Heart	16 ± 1	4 of 4	0.37	Down
Fat body	16 ± 3	4 of 4	0.36	Down
Ovary	172 ± 6	4 of 4	3.80	Up
Testis	13 ± 1	3 of 4	0.30	Down
Male accessory glands	83 ± 7	4 of 4	1.90	Up
Virgin spermatheca	9 ± 0	3 of 4	0.20	Down
Mated spermatheca	8 ± 2	3 of 4	0.18	Down
Adult carcass	41 ± 4	4 of 4	0.90	None
Larval CNS	111 ± 15	4 of 4	2.48	Up
Larval Salivary gland	88 ± 6	4 of 4	1.95	Up
Larval midgut	14 ± 1	2 of 4	0.31	Down
Larval tubule	28 ± 3	4 of 4	0.60	Down
Larval hindgut	49 ± 3	4 of 4	1.09	None
Larval fat body	3 ± 1	0 of 4	0.10	Down
Larval trachea	145 ± 13	4 of 4	3.24	Up
Larval carcass	46 ± 4	4 of 4	1.04	None
S2 cells (growing)	8 ± 1	0 of 4	0.20	Down
Whole fly	45 ± 2	4 of 4

Looking for FBgn0000547. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720