FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0000557 through 18771 annotations produced 1 hits

chr3R:27564189-27569028 (+) // 100.0 // (elongation factor 1-alpha F2):

Annotation Number : CG1873
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1624989_s_at
Accessions : protein= , nucleotide= NP_524611; /// NP_733449; /// NP_996315; /// NP_996316;
Pathway : 0006412 // translation // non-traceable author statement /// 0006412 // translation // inferred from electronic annotati
Interpro : 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /
FlyMine data for full length.
Homophila reports that CG1873 is a close match (2e-34) to human gene COXPD4;EFTU;TUFM (NP_003312), a gene associated with Combined oxidative phosphorylation deficiency 4, 610678 (3).
BioGrid reports that CG1873 interacts with CG9060 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2736 ± 59	4 of 4	4.30	Up
Head	2864 ± 67	4 of 4	4.50	Up
Eye	6572 ± 216	4 of 4	10.23	Up
Thoracicoabdominal ganglion	3251 ± 49	4 of 4	5.10	Up
Salivary gland	26 ± 4	2 of 4	0.04	Down
Crop	291 ± 16	4 of 4	0.50	Down
Midgut	10 ± 2	1 of 4	0.00	Down
Tubule	10 ± 1	1 of 4	0.00	Down
Hindgut	576 ± 17	4 of 4	0.90	None
Heart	189 ± 16	4 of 4	0.29	Down
Fat body	28 ± 7	4 of 4	0.04	Down
Ovary	5 ± 0	0 of 4	0.00	Down
Testis	144 ± 5	4 of 4	0.20	Down
Male accessory glands	18 ± 3	2 of 4	0.00	Down
Virgin spermatheca	52 ± 3	4 of 4	0.08	Down
Mated spermatheca	100 ± 10	4 of 4	0.16	Down
Adult carcass	1122 ± 22	4 of 4	1.70	Up
Larval CNS	2241 ± 87	4 of 4	3.49	Up
Larval Salivary gland	6 ± 1	0 of 4	0.01	Down
Larval midgut	18 ± 2	4 of 4	0.03	Down
Larval tubule	12 ± 2	2 of 4	0.00	Down
Larval hindgut	9 ± 1	2 of 4	0.02	Down
Larval fat body	34 ± 13	3 of 4	0.10	Down
Larval trachea	172 ± 294	4 of 4	0.27	Down
Larval carcass	43 ± 4	4 of 4	0.07	Down
S2 cells (growing)	10 ± 1	2 of 4	0.02	Down
Whole fly	642 ± 59	4 of 4

Looking for FBgn0000557. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720