Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0000564 through 18771 annotations produced 1 hits



Eclosion hormone (Eh):

Annotation Number : CG5400
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000564
Gbrowse : chr3R:13272363-13275250 (-) // 100.0 //
Probeset : 1632960_at
Accessions : protein= NP_524386;, nucleotide= NM_079662;
Pathway : chitin-based cuticle // inferred from electronic annotation /// 0018990 // ecdysis
Interpro : chitin-based cuticle // non-traceable author statement /// 0030534 // adult behavior // non-traceable author statement"
FlyMine data for FBgn0000564.
TRiP has 1 RNAi stocks for FBgn0000564 available for purchase.
VDRC has 1 RNAi stocks for FBgn0000564 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain16 72 of 4 5.60None
Head5 41 of 4 2.10None
Eye2 10 of 4 0.82None
Thoracicoabdominal ganglion1 00 of 4 0.60None
Salivary gland6 40 of 4 2.16None
Crop5 20 of 4 1.90None
Midgut2 10 of 4 1.00None
Tubule2 00 of 4 0.80None
Hindgut3 10 of 4 1.20None
Heart1 00 of 4 0.50None
Fat body1 00 of 4 0.56None
Ovary1 00 of 4 0.30None
Testis1 00 of 4 0.60None
Male accessory glands1 00 of 4 0.40None
Virgin spermatheca1 00 of 4 0.53None
Mated spermatheca2 00 of 4 0.77None
Adult carcass4 00 of 4 1.50None
Larval CNS168 274 of 458.98Up
Larval Salivary gland2 10 of 4 0.83None
Larval midgut3 10 of 4 1.32None
Larval tubule1 00 of 4 0.50None
Larval hindgut1 00 of 4 0.37None
Larval fat body3 10 of 4 1.30None
Larval trachea1 10 of 4 0.56None
Larval carcass1 00 of 4 0.43None
S2 cells (growing)1 00 of 4 0.55None
Whole fly2 10 of 4

Looking for FBgn0000564. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime