Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0000565 through 18771 annotations produced 1 hits



methionine-S-sulfoxide reductase (Eip71CD):

Annotation Number : CG7266
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000565
Gbrowse : chr3L:15504152-15506302 (+) // 100.0 //
Probeset : 1625276_a_at
Accessions : protein= NP_524085; /// NP_730047; /// NP_730048; /// NP_996093;, nucleotide= NM_079361; /// NM_168622; /// NM_168623; /// NM_206371;
Interpro : "0008113 // peptide-methionine-(S)-S-oxide reductase activity // inferred from direct assay /// 0008113 // peptide-methi
FlyMine data for FBgn0000565.
BDGP gene expression has embryonic in situ data for Eip71CD: 40 pix of staining in 26 body parts.
VDRC has 4 RNAi stocks for FBgn0000565 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain575 214 of 4 2.20Up
Head670 404 of 4 2.60Up
Eye187 134 of 4 0.72None
Thoracicoabdominal ganglion728 194 of 4 2.80Up
Salivary gland243 34 of 4 0.93None
Crop145 134 of 4 0.60Down
Midgut770 404 of 4 2.90Up
Tubule70 114 of 4 0.30Down
Hindgut85 14 of 4 0.30Down
Heart212 304 of 4 0.81None
Fat body467 2154 of 4 1.79None
Ovary171 34 of 4 0.70None
Testis29 24 of 4 0.10Down
Male accessory glands57 74 of 4 0.20Down
Virgin spermatheca162 494 of 4 0.62None
Mated spermatheca385 694 of 4 1.47None
Adult carcass667 194 of 4 2.50Up
Larval CNS176 194 of 4 0.68None
Larval Salivary gland85 94 of 4 0.33Down
Larval midgut102 154 of 4 0.39Down
Larval tubule73 104 of 4 0.30Down
Larval hindgut71 64 of 4 0.27Down
Larval fat body1281 2844 of 4 4.90Up
Larval trachea155 264 of 4 0.59Down
Larval carcass454 654 of 4 1.73None
S2 cells (growing)51 54 of 4 0.20Down
Whole fly261 314 of 4

Looking for FBgn0000565. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime