FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0000611 through 18771 annotations produced 1 hits

extradenticle (exd):

Annotation Number : CG8933
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000611
Gbrowse : chrX:15886519-15890035 (+) // 99.79 //
Probeset : 1633528_s_at
Accessions : protein= NP_523360; /// NP_727923; /// NP_727924;, nucleotide= NM_078636; /// NM_167478; /// NM_167479;
Pathway : translocation // inferred from mutant phenotype /// 0001654 // eye development // inferred from mutant phenotype /// 00
Interpro : DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II
FlyMine data for FBgn0000611.
BDGP gene expression has embryonic in situ data for exd: 30 pix of staining in 41 body parts.
BioGrid reports that CG8933 interacts with CG9188 CG2189 CG2189 CG9015 .
TRiP has 2 RNAi stocks for FBgn0000611 available for purchase.
VDRC has 4 RNAi stocks for FBgn0000611 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	581 ± 21	4 of 4	1.20	Up
Head	470 ± 30	4 of 4	1.00	None
Eye	232 ± 11	4 of 4	0.48	Down
Thoracicoabdominal ganglion	515 ± 19	4 of 4	1.10	None
Salivary gland	540 ± 6	4 of 4	1.12	Up
Crop	805 ± 12	4 of 4	1.70	Up
Midgut	434 ± 7	4 of 4	0.90	Down
Tubule	737 ± 23	4 of 4	1.50	Up
Hindgut	618 ± 2	4 of 4	1.30	Up
Heart	397 ± 25	4 of 4	0.83	Down
Fat body	489 ± 31	4 of 4	1.02	None
Ovary	972 ± 17	4 of 4	2.00	Up
Testis	107 ± 4	4 of 4	0.20	Down
Male accessory glands	531 ± 29	4 of 4	1.10	None
Virgin spermatheca	567 ± 34	4 of 4	1.18	None
Mated spermatheca	614 ± 8	4 of 4	1.28	Up
Adult carcass	303 ± 13	4 of 4	0.60	Down
Larval CNS	1012 ± 74	4 of 4	2.10	Up
Larval Salivary gland	612 ± 46	4 of 4	1.27	None
Larval midgut	523 ± 25	4 of 4	1.09	None
Larval tubule	1097 ± 29	4 of 4	2.30	Up
Larval hindgut	853 ± 6	4 of 4	1.77	Up
Larval fat body	372 ± 29	4 of 4	0.80	Down
Larval trachea	493 ± 22	4 of 4	1.03	None
Larval carcass	664 ± 9	4 of 4	1.38	Up
S2 cells (growing)	621 ± 6	4 of 4	1.29	Up
Whole fly	481 ± 8	4 of 4

Looking for FBgn0000611. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720