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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0000633 through 18771 annotations produced 1 hits



faint sausage (fas):

Annotation Number : CG17716
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000633
Gbrowse : chr2R:9510592-9636882 (+) // 100.0 //
Probeset : 1628009_at
Accessions : protein= NP_523731;, nucleotide= NM_079007;
FlyMine data for FBgn0000633.
VDRC has 6 RNAi stocks for FBgn0000633 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain327 ± 44 of 435.90Up
Head66 ± 54 of 4 7.30Up
Eye84 ± 94 of 4 9.26Up
Thoracicoabdominal ganglion378 ± 204 of 441.50Up
Salivary gland16 ± 40 of 4 1.78None
Crop14 ± 10 of 4 1.60None
Midgut3 ± 10 of 4 0.40None
Tubule3 ± 00 of 4 0.40Down
Hindgut2 ± 20 of 4 0.30None
Heart23 ± 22 of 4 2.57Up
Fat body6 ± 50 of 4 0.74None
Ovary1 ± 00 of 4 0.10Down
Testis2 ± 00 of 4 0.30None
Male accessory glands4 ± 10 of 4 0.40None
Virgin spermatheca12 ± 20 of 4 1.37None
Mated spermatheca13 ± 20 of 4 1.44None
Adult carcass4 ± 10 of 4 0.50None
Larval CNS377 ± 464 of 441.39Up
Larval Salivary gland4 ± 10 of 4 0.44None
Larval midgut3 ± 10 of 4 0.43None
Larval tubule3 ± 20 of 4 0.30None
Larval hindgut0 ± 00 of 4 0.07Down
Larval fat body2 ± 10 of 4 0.30None
Larval trachea0 ± 00 of 4 0.10Down
Larval carcass1 ± 00 of 4 0.14Down
S2 cells (growing)2 ± 00 of 4 0.24None
Whole fly9 ± 21 of 4

Looking for FBgn0000633. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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