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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0001079 through 18771 annotations produced 1 hits



fused (fu):

Annotation Number : CG6551
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001079
Gbrowse : chrX:18551796-18555263 (+) // 100.0 //
Probeset : 1635117_at
Accessions : protein= NP_477499;, nucleotide= NM_058151;
Pathway : 0005737 // cytoplasm // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0035301 //
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0001079.
Homophila reports that CG6551 is a close match (8e-11) to human gene ANKK1 (NP_848605), a gene associated with Dopamine receptor D2, reduced brain density of (3).
BioGrid reports that CG6551 interacts with CG1708 CG6054 CG6054 CG6054 CG6054 CG6054 CG6054 CG6054 CG6054 CG6054 CG6054 CG3578 CG2125 CG2125 CG2125 CG1708 CG4637 CG4637 CG4637 CG4637 CG10197 CG2411 CG2411 CG2411 CG2411 CG2411 CG2411 CG1857 CG7850 CG2125 CG1708 CG1708 CG1708 .
TRiP has 4 RNAi stocks for FBgn0001079 available for purchase.
VDRC has 2 RNAi stocks for FBgn0001079 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain110 ± 34 of 4 1.00None
Head64 ± 54 of 4 0.60Down
Eye45 ± 24 of 4 0.40Down
Thoracicoabdominal ganglion79 ± 34 of 4 0.70Down
Salivary gland47 ± 34 of 4 0.41Down
Crop79 ± 74 of 4 0.70Down
Midgut40 ± 14 of 4 0.30Down
Tubule32 ± 14 of 4 0.30Down
Hindgut43 ± 54 of 4 0.40Down
Heart37 ± 14 of 4 0.32Down
Fat body67 ± 84 of 4 0.58Down
Ovary382 ± 84 of 4 3.30Up
Testis16 ± 14 of 4 0.10Down
Male accessory glands29 ± 24 of 4 0.30Down
Virgin spermatheca78 ± 84 of 4 0.68Down
Mated spermatheca67 ± 34 of 4 0.58Down
Adult carcass41 ± 14 of 4 0.40Down
Larval CNS195 ± 104 of 4 1.70Up
Larval Salivary gland57 ± 44 of 4 0.50Down
Larval midgut51 ± 64 of 4 0.44Down
Larval tubule47 ± 24 of 4 0.40Down
Larval hindgut62 ± 44 of 4 0.54Down
Larval fat body51 ± 54 of 4 0.40Down
Larval trachea85 ± 54 of 4 0.74Down
Larval carcass65 ± 54 of 4 0.57Down
S2 cells (growing)135 ± 44 of 4 1.18None
Whole fly115 ± 94 of 4

Looking for FBgn0001079. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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