FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0001133 through 18771 annotations produced 2 hits

grauzone (grau):

Annotation Number : CG33133
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001133
Gbrowse : chr2R:16897270-16899424 (-) // 100.0 //
Probeset : 1633634_at
Accessions : protein= NP_788422;, nucleotide= NM_176242;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay ///
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from elect
FlyMine data for FBgn0001133.
BDGP gene expression has embryonic in situ data for grau: 13 pix of staining in 6 body parts.
Homophila reports that CG33133 is a close match (4e-15) to human gene AITD3;ZFAT1;ZNF406 (NP_065914), a gene associated with {Autoimmune thyroid disease, susceptibility to, 3}, 608175 (3).
BioGrid reports that CG33133 interacts with CG3995 CG6654 CG7928 CG33133 CG5303 CG6315 CG7386 CG8591 CG8942 CG11330 CG11330 CG11330 CG11330 .
TRiP has 1 RNAi stocks for FBgn0001133 available for purchase.
VDRC has 4 RNAi stocks for FBgn0001133 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	98 ± 2	4 of 4	1.60	Up
Head	59 ± 1	4 of 4	1.00	None
Eye	60 ± 2	4 of 4	0.99	None
Thoracicoabdominal ganglion	84 ± 2	4 of 4	1.40	Up
Salivary gland	79 ± 6	4 of 4	1.29	None
Crop	88 ± 2	4 of 4	1.40	Up
Midgut	43 ± 1	4 of 4	0.70	Down
Tubule	85 ± 3	4 of 4	1.40	Up
Hindgut	66 ± 2	4 of 4	1.10	None
Heart	66 ± 4	4 of 4	1.07	None
Fat body	58 ± 8	4 of 4	0.95	None
Ovary	113 ± 4	4 of 4	1.80	Up
Testis	27 ± 1	4 of 4	0.40	Down
Male accessory glands	90 ± 6	4 of 4	1.50	Up
Virgin spermatheca	62 ± 1	4 of 4	1.02	None
Mated spermatheca	59 ± 2	4 of 4	0.97	None
Adult carcass	52 ± 5	4 of 4	0.90	None
Larval CNS	90 ± 4	4 of 4	1.47	Up
Larval Salivary gland	77 ± 2	4 of 4	1.25	Up
Larval midgut	35 ± 1	4 of 4	0.57	Down
Larval tubule	63 ± 2	4 of 4	1.00	None
Larval hindgut	59 ± 1	4 of 4	0.96	None
Larval fat body	51 ± 3	4 of 4	0.80	None
Larval trachea	53 ± 6	4 of 4	0.86	None
Larval carcass	38 ± 1	4 of 4	0.62	Down
S2 cells (growing)	78 ± 1	4 of 4	1.28	Up
Whole fly	61 ± 1	4 of 4

/// grauzone (CG30291 /// grau):

Annotation Number : CG30291
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050291
Gbrowse : chr2R:16895259-16897078 (-) // 100.0 //
Probeset : 1639747_at
Accessions : protein= NP_726016;, nucleotide= NM_166417;
Pathway : 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay
Interpro : 0003704 // specific RNA polymerase II transcription factor activity // non-traceable author statement /// 0003704 // spe
FlyMine data for FBgn0050291.
BDGP gene expression has embryonic in situ data for CG30291: 11 pix of staining in 4 body parts.
BioGrid reports that CG30291 interacts with CG3610 CG6156 .
VDRC has 2 RNAi stocks for FBgn0050291 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	90 ± 3	4 of 4	0.80	Down
Head	126 ± 4	4 of 4	1.20	Up
Eye	133 ± 6	4 of 4	1.23	Up
Thoracicoabdominal ganglion	92 ± 3	4 of 4	0.80	Down
Salivary gland	526 ± 23	4 of 4	4.85	Up
Crop	152 ± 11	4 of 4	1.40	Up
Midgut	159 ± 3	4 of 4	1.50	Up
Tubule	58 ± 6	4 of 4	0.50	Down
Hindgut	104 ± 3	4 of 4	1.00	None
Heart	113 ± 5	4 of 4	1.05	None
Fat body	143 ± 30	4 of 4	1.33	None
Ovary	126 ± 3	4 of 4	1.20	Up
Testis	51 ± 2	4 of 4	0.50	Down
Male accessory glands	360 ± 26	4 of 4	3.30	Up
Virgin spermatheca	92 ± 4	4 of 4	0.85	Down
Mated spermatheca	135 ± 3	4 of 4	1.25	Up
Adult carcass	124 ± 12	4 of 4	1.10	None
Larval CNS	98 ± 2	4 of 4	0.90	Down
Larval Salivary gland	579 ± 58	4 of 4	5.34	Up
Larval midgut	101 ± 5	4 of 4	0.93	None
Larval tubule	100 ± 3	4 of 4	0.90	None
Larval hindgut	106 ± 6	4 of 4	0.98	None
Larval fat body	192 ± 19	4 of 4	1.80	Up
Larval trachea	150 ± 15	4 of 4	1.39	Up
Larval carcass	143 ± 11	4 of 4	1.32	None
S2 cells (growing)	80 ± 7	4 of 4	0.74	Down
Whole fly	108 ± 1	4 of 4

Looking for FBgn0001133. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720