FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0001148 through 18771 annotations produced 1 hits

gooseberry (gsb):

Annotation Number : CG3388
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001148
Gbrowse : chr2R:20949670-20951985 (+) // 100.0 //
Probeset : 1637639_at
Accessions : protein= NP_523863;, nucleotide= NM_079139;
Pathway : DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred fr
Interpro : 0005634 // nucleus // inferred from mutant phenotype /// 0005634 // nucleus // non-traceable author statement /// 000563
FlyMine data for FBgn0001148.
BDGP gene expression has embryonic in situ data for gsb: 67 pix of staining in 21 body parts.
Homophila reports that CG3388 is a close match (9e-12) to human gene KTCN;PPCD;PPD;RINX;VSX1 (NP_055403), a gene associated with Corneal dystrophy, hereditary polymorphous posterior, 122000 (3);Craniofacial anomalies, empty sella turcica, corneal endothelial changes, and abnormal retinal and auditory bipolar cells (3);Keratoconus, 148300 (3).
BioGrid reports that CG3388 interacts with CG10798 CG9015 CG3938 CG1464 CG17835 CG6716 CG6716 CG6716 CG4889 .
TRiP has 1 RNAi stocks for FBgn0001148 available for purchase.
VDRC has 3 RNAi stocks for FBgn0001148 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 0	0 of 4	0.60	None
Head	1 ± 0	0 of 4	0.20	None
Eye	1 ± 0	0 of 4	0.22	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.30	None
Salivary gland	7 ± 4	0 of 4	1.35	None
Crop	3 ± 1	0 of 4	0.60	None
Midgut	3 ± 1	0 of 4	0.60	None
Tubule	1 ± 0	0 of 4	0.30	Down
Hindgut	2 ± 0	0 of 4	0.40	None
Heart	2 ± 0	0 of 4	0.46	None
Fat body	4 ± 1	0 of 4	0.84	None
Ovary	0 ± 0	0 of 4	0.10	None
Testis	1 ± 0	0 of 4	0.30	None
Male accessory glands	1 ± 0	0 of 4	0.20	None
Virgin spermatheca	1 ± 0	0 of 4	0.32	None
Mated spermatheca	1 ± 0	0 of 4	0.24	None
Adult carcass	3 ± 1	0 of 4	0.60	None
Larval CNS	11 ± 2	3 of 4	2.25	None
Larval Salivary gland	2 ± 2	0 of 4	0.55	None
Larval midgut	1 ± 0	0 of 4	0.24	None
Larval tubule	2 ± 1	0 of 4	0.50	None
Larval hindgut	3 ± 1	0 of 4	0.67	None
Larval fat body	3 ± 2	0 of 4	0.70	None
Larval trachea	1 ± 1	0 of 4	0.22	None
Larval carcass	3 ± 0	0 of 4	0.71	None
S2 cells (growing)	86 ± 5	4 of 4	16.35	Up
Whole fly	5 ± 2	0 of 4

Looking for FBgn0001148. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720