FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0001313 through 18771 annotations produced 3 hits

male fertility factor kl2 (kl-2):

Annotation Number : CG17866
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001313
Gbrowse : chrYHet:81426-151143 (+) // 99.99 //
Probeset : 1629591_at
Accessions : protein= NP_001015505;, nucleotide= NM_001015505;
Pathway : 0005858 // axonemal dynein complex // inferred from sequence or structural similarity /// 0005875 // microtubule associa
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from seq
FlyMine data for FBgn0001313.
VDRC has 1 RNAi stocks for FBgn0001313 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.30	Down
Head	3 ± 0	0 of 4	0.40	Down
Eye	1 ± 0	0 of 4	0.18	Down
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.20	Down
Salivary gland	8 ± 3	0 of 4	1.10	None
Crop	3 ± 1	0 of 4	0.50	Down
Midgut	4 ± 1	0 of 4	0.50	None
Tubule	3 ± 0	0 of 4	0.50	Down
Hindgut	3 ± 2	0 of 4	0.40	None
Heart	2 ± 1	0 of 4	0.34	None
Fat body	5 ± 3	0 of 4	0.76	None
Ovary	2 ± 0	0 of 4	0.30	Down
Testis	54 ± 1	4 of 4	7.10	Up
Male accessory glands	4 ± 1	0 of 4	0.60	None
Virgin spermatheca	2 ± 1	0 of 4	0.26	Down
Mated spermatheca	5 ± 1	0 of 4	0.78	None
Adult carcass	5 ± 2	0 of 4	0.70	None
Larval CNS	2 ± 0	0 of 4	0.36	Down
Larval Salivary gland	6 ± 1	0 of 4	0.90	None
Larval midgut	5 ± 1	0 of 4	0.68	None
Larval tubule	2 ± 0	0 of 4	0.30	Down
Larval hindgut	2 ± 0	0 of 4	0.29	Down
Larval fat body	9 ± 2	0 of 4	1.20	None
Larval trachea	1 ± 2	0 of 4	0.25	Down
Larval carcass	4 ± 0	0 of 4	0.57	None
S2 cells (growing)	3 ± 0	0 of 4	0.42	Down
Whole fly	7 ± 1	0 of 4

male fertility factor kl2 (kl-2):

Annotation Number : CG40099
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001313
Gbrowse : chrYHet:81660-83076 (+) // 100.0 //
Probeset : 1632981_s_at
Accessions : protein= NP_001015505;, nucleotide= NM_001015505;
Pathway : 0005858 // axonemal dynein complex // inferred from sequence or structural similarity /// 0005875 // microtubule associa
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from seq
FlyMine data for FBgn0001313.
VDRC has 1 RNAi stocks for FBgn0001313 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.80	None
Head	2 ± 1	0 of 4	2.80	None
Eye	5 ± 0	1 of 4	6.30	Up
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.90	None
Salivary gland	7 ± 3	0 of 4	9.55	None
Crop	2 ± 0	0 of 4	3.10	None
Midgut	2 ± 1	0 of 4	3.00	None
Tubule	2 ± 0	0 of 4	3.60	Up
Hindgut	3 ± 1	0 of 4	3.60	None
Heart	3 ± 0	0 of 4	4.00	Up
Fat body	1 ± 1	0 of 4	2.06	None
Ovary	1 ± 0	0 of 4	1.70	None
Testis	1 ± 0	0 of 4	1.90	None
Male accessory glands	2 ± 1	0 of 4	2.60	None
Virgin spermatheca	2 ± 1	0 of 4	2.42	None
Mated spermatheca	4 ± 1	1 of 4	5.00	None
Adult carcass	5 ± 1	0 of 4	6.40	None
Larval CNS	1 ± 0	0 of 4	1.61	None
Larval Salivary gland	2 ± 1	0 of 4	2.45	None
Larval midgut	1 ± 0	0 of 4	2.27	None
Larval tubule	1 ± 0	0 of 4	1.70	None
Larval hindgut	2 ± 1	0 of 4	3.09	None
Larval fat body	1 ± 0	0 of 4	1.30	None
Larval trachea	1 ± 0	0 of 4	2.03	None
Larval carcass	0 ± 0	0 of 4	0.82	None
S2 cells (growing)	0 ± 0	0 of 4	0.70	None
Whole fly	0 ± 0	0 of 4

male fertility factor kl2 (kl-2):

Annotation Number : CG40099
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001313
Gbrowse : chrYHet:81660-83076 (+) // 100.0 //
Probeset : 1626389_at
Accessions : protein= NP_001015505;, nucleotide= NM_001015505;
Pathway : 0005858 // axonemal dynein complex // inferred from sequence or structural similarity /// 0005875 // microtubule associa
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from seq
FlyMine data for FBgn0001313.
VDRC has 1 RNAi stocks for FBgn0001313 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	2.80	None
Head	1 ± 0	0 of 4	3.00	None
Eye	0 ± 0	0 of 4	1.53	None
Thoracicoabdominal ganglion	2 ± 1	0 of 4	4.70	None
Salivary gland	5 ± 2	0 of 4	11.37	None
Crop	2 ± 0	0 of 4	4.30	None
Midgut	0 ± 0	0 of 4	1.80	None
Tubule	1 ± 0	0 of 4	3.10	Up
Hindgut	0 ± 0	0 of 4	1.20	None
Heart	2 ± 1	0 of 4	5.53	None
Fat body	1 ± 1	0 of 4	2.63	None
Ovary	0 ± 0	0 of 4	0.80	None
Testis	3 ± 0	1 of 4	6.20	Up
Male accessory glands	4 ± 0	0 of 4	9.60	Up
Virgin spermatheca	0 ± 0	0 of 4	1.84	None
Mated spermatheca	1 ± 0	0 of 4	2.21	None
Adult carcass	1 ± 1	0 of 4	3.50	None
Larval CNS	0 ± 0	0 of 4	0.26	None
Larval Salivary gland	2 ± 1	0 of 4	4.16	None
Larval midgut	0 ± 0	0 of 4	1.68	None
Larval tubule	0 ± 0	0 of 4	0.90	None
Larval hindgut	2 ± 0	1 of 4	4.11	None
Larval fat body	0 ± 0	0 of 4	1.70	None
Larval trachea	1 ± 0	0 of 4	3.00	None
Larval carcass	1 ± 1	0 of 4	3.63	None
S2 cells (growing)	0 ± 0	0 of 4	0.79	None
Whole fly	0 ± 0	0 of 4

Looking for FBgn0001313. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720