FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0001941 through 18771 annotations produced 1 hits

degenerative spermatocyte (ifc):

Annotation Number : CG9078
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001941
Gbrowse : chr2L:5986323-5988858 (+) // 100.0 //
Probeset : 1625414_at
Accessions : protein= NP_476594;, nucleotide= NM_057246;
Pathway : 0005739 // mitochondrion // traceable author statement /// 0005886 // plasma membrane // inferred from sequence or struc
Interpro : "0004768 // stearoyl-CoA 9-desaturase activity // inferred from sequence or structural similarity /// 0004768 // stearoy
FlyMine data for FBgn0001941.
BDGP gene expression has embryonic in situ data for ifc: 20 pix of staining in 20 body parts.
TRiP has 1 RNAi stocks for FBgn0001941 available for purchase.
VDRC has 1 RNAi stocks for FBgn0001941 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	184 ± 8	4 of 4	0.50	Down
Head	168 ± 5	4 of 4	0.50	Down
Eye	147 ± 5	4 of 4	0.40	Down
Thoracicoabdominal ganglion	249 ± 10	4 of 4	0.70	Down
Salivary gland	326 ± 20	4 of 4	0.88	None
Crop	308 ± 12	4 of 4	0.80	Down
Midgut	1560 ± 26	4 of 4	4.20	Up
Tubule	1613 ± 97	4 of 4	4.40	Up
Hindgut	763 ± 22	4 of 4	2.10	Up
Heart	217 ± 6	4 of 4	0.59	Down
Fat body	127 ± 12	4 of 4	0.34	Down
Ovary	609 ± 6	4 of 4	1.60	Up
Testis	155 ± 7	4 of 4	0.40	Down
Male accessory glands	416 ± 24	4 of 4	1.10	None
Virgin spermatheca	254 ± 20	4 of 4	0.69	Down
Mated spermatheca	297 ± 13	4 of 4	0.81	Down
Adult carcass	96 ± 4	4 of 4	0.30	Down
Larval CNS	501 ± 9	4 of 4	1.36	Up
Larval Salivary gland	470 ± 15	4 of 4	1.27	Up
Larval midgut	1665 ± 167	4 of 4	4.51	Up
Larval tubule	1016 ± 16	4 of 4	2.80	Up
Larval hindgut	1018 ± 33	4 of 4	2.76	Up
Larval fat body	113 ± 3	4 of 4	0.30	Down
Larval trachea	316 ± 32	4 of 4	0.86	Down
Larval carcass	288 ± 17	4 of 4	0.78	Down
S2 cells (growing)	1267 ± 20	4 of 4	3.43	Up
Whole fly	369 ± 10	4 of 4

Looking for FBgn0001941. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720