FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0001942 through 18771 annotations produced 1 hits

Eukaryotic initiation factor 4a (eIF-4a):

Annotation Number : CG9075
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001942
Gbrowse : chr2L:5981758-5985559 (+) // 99.23 //
Probeset : 1638664_s_at
Accessions : protein= NP_476595; /// NP_723137; /// NP_723138; /// NP_723139;, nucleotide= NM_057247; /// NM_164668; /// NM_164669; /// NM_164670;
Pathway : via spliceosome // inferred from mutant phenotype /// 0002168 // instar larval development // traceable author statemen
Interpro : 0005634 // nucleus // inferred by curator /// 0005829 // cytosol // inferred from sequence or structural similarity ///
FlyMine data for FBgn0001942.
BDGP gene expression has embryonic in situ data for eIF-4a: 4 pix of staining in 1 body parts.
BioGrid reports that CG9075 interacts with CG9572 CG4654 CG6376 CG3936 CG5671 CG3839 .
TRiP has 1 RNAi stocks for FBgn0001942 available for purchase.
VDRC has 3 RNAi stocks for FBgn0001942 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3005 ± 62	4 of 4	1.00	None
Head	3607 ± 94	4 of 4	1.30	Up
Eye	4196 ± 163	4 of 4	1.46	Up
Thoracicoabdominal ganglion	3503 ± 66	4 of 4	1.20	Up
Salivary gland	7727 ± 302	4 of 4	2.69	Up
Crop	3985 ± 132	4 of 4	1.40	Up
Midgut	3541 ± 80	4 of 4	1.20	Up
Tubule	4480 ± 117	4 of 4	1.60	Up
Hindgut	3746 ± 87	4 of 4	1.30	Up
Heart	4465 ± 220	4 of 4	1.56	Up
Fat body	4964 ± 856	4 of 4	1.73	Up
Ovary	2631 ± 37	4 of 4	0.90	None
Testis	1529 ± 49	4 of 4	0.50	Down
Male accessory glands	6215 ± 153	4 of 4	2.20	Up
Virgin spermatheca	4423 ± 118	4 of 4	1.54	Up
Mated spermatheca	4488 ± 128	4 of 4	1.56	Up
Adult carcass	4088 ± 123	4 of 4	1.40	Up
Larval CNS	2615 ± 104	4 of 4	0.91	None
Larval Salivary gland	6080 ± 171	4 of 4	2.12	Up
Larval midgut	3780 ± 56	4 of 4	1.32	Up
Larval tubule	4102 ± 94	4 of 4	1.40	Up
Larval hindgut	3810 ± 72	4 of 4	1.33	Up
Larval fat body	5477 ± 545	4 of 4	1.90	Up
Larval trachea	3528 ± 169	4 of 4	1.23	Up
Larval carcass	3864 ± 205	4 of 4	1.35	Up
S2 cells (growing)	3811 ± 34	4 of 4	1.33	Up
Whole fly	2870 ± 91	4 of 4

Looking for FBgn0001942. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720