FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0001978 through 18771 annotations produced 1 hits

Chorion-factor-4 (stc):

Annotation Number : CG3647
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001978
Gbrowse : chr2L:15113481-15118070 (+) // 100.0 //
Probeset : 1640237_a_at
Accessions : protein= NP_476598; /// NP_476599;, nucleotide= NM_057250; /// NM_057251;
Pathway : DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author
Interpro : 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural
FlyMine data for FBgn0001978.
BioGrid reports that CG3647 interacts with CG3820 CG4453 CG4818 CG7360 CG8426 .
VDRC has 2 RNAi stocks for FBgn0001978 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	194 ± 3	4 of 4	0.70	Down
Head	116 ± 3	4 of 4	0.40	Down
Eye	107 ± 2	4 of 4	0.38	Down
Thoracicoabdominal ganglion	168 ± 8	4 of 4	0.60	Down
Salivary gland	242 ± 11	4 of 4	0.87	None
Crop	180 ± 5	4 of 4	0.60	Down
Midgut	218 ± 23	4 of 4	0.80	None
Tubule	212 ± 13	4 of 4	0.80	Down
Hindgut	148 ± 1	4 of 4	0.50	Down
Heart	92 ± 2	4 of 4	0.33	Down
Fat body	171 ± 30	4 of 4	0.61	Down
Ovary	544 ± 8	4 of 4	1.90	Up
Testis	339 ± 18	4 of 4	1.20	None
Male accessory glands	617 ± 14	4 of 4	2.20	Up
Virgin spermatheca	246 ± 10	4 of 4	0.88	None
Mated spermatheca	294 ± 7	4 of 4	1.05	None
Adult carcass	106 ± 10	4 of 4	0.40	Down
Larval CNS	235 ± 16	4 of 4	0.84	None
Larval Salivary gland	394 ± 10	4 of 4	1.41	Up
Larval midgut	199 ± 20	4 of 4	0.71	Down
Larval tubule	131 ± 2	4 of 4	0.50	Down
Larval hindgut	158 ± 6	4 of 4	0.57	Down
Larval fat body	140 ± 21	4 of 4	0.50	Down
Larval trachea	171 ± 13	4 of 4	0.61	Down
Larval carcass	235 ± 19	4 of 4	0.84	None
S2 cells (growing)	216 ± 14	4 of 4	0.77	Down
Whole fly	279 ± 16	4 of 4

Looking for FBgn0001978. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720