FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0001989 through 18771 annotations produced 2 hits

lethal (2) 35Di (l(2)35Di):

Annotation Number : CG13240
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001989
Gbrowse : chr2L:15750407-15751054 (-) // 100.0 //
Probeset : 1630062_a_at
Accessions : protein= NP_609765; /// NP_723927;, nucleotide= NM_135921; /// NM_165126;
Pathway : NADH to ubiquinone // inferred from sequence or structural similarity /// 0055114 // oxidation reduction // inferred fr
Interpro : 0005747 // mitochondrial respiratory chain complex I // inferred from sequence or structural similarity
FlyMine data for FBgn0001989.
VDRC has 2 RNAi stocks for FBgn0001989 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	595 ± 15	4 of 4	1.10	Up
Head	666 ± 8	4 of 4	1.30	Up
Eye	997 ± 36	4 of 4	1.91	Up
Thoracicoabdominal ganglion	770 ± 7	4 of 4	1.50	Up
Salivary gland	1235 ± 9	4 of 4	2.37	Up
Crop	540 ± 28	4 of 4	1.00	None
Midgut	667 ± 9	4 of 4	1.30	Up
Tubule	654 ± 28	4 of 4	1.30	Up
Hindgut	1047 ± 28	4 of 4	2.00	Up
Heart	705 ± 27	4 of 4	1.35	Up
Fat body	674 ± 84	4 of 4	1.29	Up
Ovary	293 ± 3	4 of 4	0.60	Down
Testis	225 ± 13	4 of 4	0.40	Down
Male accessory glands	543 ± 38	4 of 4	1.00	None
Virgin spermatheca	469 ± 27	4 of 4	0.90	None
Mated spermatheca	398 ± 11	4 of 4	0.76	Down
Adult carcass	1260 ± 72	4 of 4	2.40	Up
Larval CNS	345 ± 26	4 of 4	0.66	Down
Larval Salivary gland	629 ± 49	4 of 4	1.21	None
Larval midgut	496 ± 6	4 of 4	0.95	None
Larval tubule	542 ± 36	4 of 4	1.00	None
Larval hindgut	665 ± 20	4 of 4	1.28	Up
Larval fat body	300 ± 23	4 of 4	0.60	Down
Larval trachea	411 ± 48	4 of 4	0.79	Down
Larval carcass	575 ± 41	4 of 4	1.11	None
S2 cells (growing)	388 ± 9	4 of 4	0.75	Down
Whole fly	521 ± 22	4 of 4

lethal (2) 35Di (l(2)35Di):

Annotation Number : CG13240
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001989
Gbrowse : chr2L:15749608-15751054 (-) // 100.0 //
Probeset : 1631318_at
Accessions : protein= NP_609765; /// NP_723927;, nucleotide= NM_135921; /// NM_165126;
Pathway : NADH to ubiquinone // inferred from sequence or structural similarity /// 0055114 // oxidation reduction // inferred fr
Interpro : 0005747 // mitochondrial respiratory chain complex I // inferred from sequence or structural similarity
FlyMine data for FBgn0001989.
VDRC has 2 RNAi stocks for FBgn0001989 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	786 ± 12	4 of 4	1.00	None
Head	895 ± 29	4 of 4	1.20	None
Eye	1318 ± 40	4 of 4	1.75	Up
Thoracicoabdominal ganglion	1261 ± 64	4 of 4	1.70	Up
Salivary gland	2033 ± 89	4 of 4	2.70	Up
Crop	796 ± 36	4 of 4	1.10	None
Midgut	748 ± 20	4 of 4	1.00	None
Tubule	1258 ± 41	4 of 4	1.70	Up
Hindgut	1413 ± 37	4 of 4	1.90	Up
Heart	1019 ± 24	4 of 4	1.35	Up
Fat body	988 ± 60	4 of 4	1.31	Up
Ovary	404 ± 3	4 of 4	0.50	Down
Testis	365 ± 5	4 of 4	0.50	Down
Male accessory glands	744 ± 16	4 of 4	1.00	None
Virgin spermatheca	2034 ± 46	4 of 4	2.70	Up
Mated spermatheca	1859 ± 78	4 of 4	2.46	Up
Adult carcass	1734 ± 125	4 of 4	2.30	Up
Larval CNS	473 ± 31	4 of 4	0.63	Down
Larval Salivary gland	938 ± 24	4 of 4	1.24	Up
Larval midgut	767 ± 22	4 of 4	1.02	None
Larval tubule	624 ± 52	4 of 4	0.80	None
Larval hindgut	1044 ± 42	4 of 4	1.38	Up
Larval fat body	410 ± 22	4 of 4	0.50	Down
Larval trachea	592 ± 44	4 of 4	0.79	Down
Larval carcass	995 ± 108	4 of 4	1.32	None
S2 cells (growing)	388 ± 8	4 of 4	0.51	Down
Whole fly	754 ± 48	4 of 4

Looking for FBgn0001989. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720