FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0002183 through 18771 annotations produced 2 hits

supressor of Ty element 16 (dre4):

Annotation Number : CG1828
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002183
Gbrowse : chr3L:1871572-1876336 (-) // 100.0 //
Probeset : 1630638_at
Accessions : protein= NP_476610; /// NP_728686;, nucleotide= NM_057262; /// NM_167922;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0035101 // FACT complex // inferred from direct assay ///
Interpro : 0003677 // DNA binding // inferred from sequence or structural similarity
FlyMine data for FBgn0002183.
BioGrid reports that CG1828 interacts with CG33261 CG33261 .
TRiP has 4 RNAi stocks for FBgn0002183 available for purchase.
VDRC has 2 RNAi stocks for FBgn0002183 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	94 ± 3	4 of 4	6.90	Up
Head	40 ± 1	4 of 4	3.00	Up
Eye	22 ± 2	4 of 4	1.61	Up
Thoracicoabdominal ganglion	68 ± 2	4 of 4	4.90	Up
Salivary gland	82 ± 10	4 of 4	6.01	Up
Crop	41 ± 2	4 of 4	3.00	Up
Midgut	50 ± 8	1 of 4	3.70	Up
Tubule	14 ± 3	1 of 4	1.00	None
Hindgut	48 ± 2	4 of 4	3.50	Up
Heart	12 ± 0	2 of 4	0.91	None
Fat body	18 ± 9	0 of 4	1.32	None
Ovary	12 ± 3	2 of 4	0.90	None
Testis	11 ± 1	0 of 4	0.90	None
Male accessory glands	155 ± 3	4 of 4	11.30	Up
Virgin spermatheca	26 ± 7	0 of 4	1.92	None
Mated spermatheca	33 ± 4	0 of 4	2.44	Up
Adult carcass	17 ± 3	0 of 4	1.20	None
Larval CNS	259 ± 7	4 of 4	18.90	Up
Larval Salivary gland	182 ± 12	4 of 4	13.29	Up
Larval midgut	41 ± 2	0 of 4	3.03	Up
Larval tubule	37 ± 4	4 of 4	2.70	Up
Larval hindgut	56 ± 2	4 of 4	4.07	Up
Larval fat body	22 ± 2	3 of 4	1.60	Up
Larval trachea	85 ± 3	4 of 4	6.20	Up
Larval carcass	78 ± 2	4 of 4	5.70	Up
S2 cells (growing)	164 ± 2	4 of 4	11.94	Up
Whole fly	13 ± 1	0 of 4

supressor of Ty element 16 (dre4):

Annotation Number : CG1828
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002183
Gbrowse : chr3L:1871572-1876336 (-) // 100.0 //
Probeset : 1632743_a_at
Accessions : protein= NP_476610; /// NP_728686;, nucleotide= NM_057262; /// NM_167922;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0035101 // FACT complex // inferred from direct assay ///
Interpro : 0003677 // DNA binding // inferred from sequence or structural similarity
FlyMine data for FBgn0002183.
BioGrid reports that CG1828 interacts with CG33261 CG33261 .
TRiP has 4 RNAi stocks for FBgn0002183 available for purchase.
VDRC has 2 RNAi stocks for FBgn0002183 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	113 ± 2	4 of 4	0.50	Down
Head	68 ± 3	4 of 4	0.30	Down
Eye	70 ± 3	4 of 4	0.32	Down
Thoracicoabdominal ganglion	96 ± 3	4 of 4	0.40	Down
Salivary gland	95 ± 6	4 of 4	0.42	Down
Crop	75 ± 2	4 of 4	0.30	Down
Midgut	70 ± 1	4 of 4	0.30	Down
Tubule	57 ± 3	4 of 4	0.30	Down
Hindgut	90 ± 3	4 of 4	0.40	Down
Heart	58 ± 2	4 of 4	0.26	Down
Fat body	62 ± 4	4 of 4	0.28	Down
Ovary	486 ± 2	4 of 4	2.20	Up
Testis	168 ± 15	4 of 4	0.70	None
Male accessory glands	131 ± 8	4 of 4	0.60	Down
Virgin spermatheca	41 ± 5	4 of 4	0.18	Down
Mated spermatheca	45 ± 5	4 of 4	0.20	Down
Adult carcass	76 ± 7	4 of 4	0.30	Down
Larval CNS	522 ± 24	4 of 4	2.33	Up
Larval Salivary gland	208 ± 4	4 of 4	0.93	None
Larval midgut	78 ± 1	4 of 4	0.35	Down
Larval tubule	79 ± 4	4 of 4	0.40	Down
Larval hindgut	130 ± 6	4 of 4	0.58	Down
Larval fat body	64 ± 4	4 of 4	0.30	Down
Larval trachea	222 ± 20	4 of 4	0.99	None
Larval carcass	136 ± 14	4 of 4	0.61	Down
S2 cells (growing)	501 ± 22	4 of 4	2.23	Up
Whole fly	224 ± 24	4 of 4

Looking for FBgn0002183. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720