FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0002441 through 18771 annotations produced 2 hits

tumor-supressor (l(3)mbt):

Annotation Number : CG5954
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002441
Gbrowse : chr3R:23091951-23098069 (-) // 100.0 //
Probeset : 1637599_at
Accessions : protein= NP_524529; /// NP_733209;, nucleotide= NM_079805; /// NM_170330;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic
Interpro : 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarit
FlyMine data for FBgn0002441.
TRiP has 2 RNAi stocks for FBgn0002441 available for purchase.
VDRC has 3 RNAi stocks for FBgn0002441 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 0	0 of 4	0.80	None
Head	3 ± 1	1 of 4	0.60	None
Eye	3 ± 1	0 of 4	0.55	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.30	None
Salivary gland	18 ± 2	1 of 4	3.31	Up
Crop	7 ± 0	0 of 4	1.30	None
Midgut	10 ± 4	1 of 4	1.80	None
Tubule	4 ± 0	0 of 4	0.90	Down
Hindgut	8 ± 1	0 of 4	1.50	None
Heart	4 ± 1	1 of 4	0.76	None
Fat body	12 ± 4	3 of 4	2.28	Up
Ovary	2 ± 0	1 of 4	0.40	None
Testis	16 ± 1	4 of 4	3.00	Up
Male accessory glands	4 ± 2	0 of 4	0.80	None
Virgin spermatheca	4 ± 1	0 of 4	0.77	None
Mated spermatheca	4 ± 0	1 of 4	0.82	None
Adult carcass	5 ± 2	0 of 4	0.90	None
Larval CNS	4 ± 3	2 of 4	0.88	None
Larval Salivary gland	10 ± 2	2 of 4	1.84	None
Larval midgut	21 ± 4	0 of 4	3.72	Up
Larval tubule	7 ± 2	2 of 4	1.30	None
Larval hindgut	3 ± 0	1 of 4	0.68	None
Larval fat body	6 ± 2	1 of 4	1.20	None
Larval trachea	2 ± 2	0 of 4	0.38	None
Larval carcass	4 ± 0	0 of 4	0.88	None
S2 cells (growing)	3 ± 1	0 of 4	0.54	None
Whole fly	5 ± 1	1 of 4

tumor-supressor (l(3)mbt):

Annotation Number : CG5954
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002441
Gbrowse : chr3R:23092046-23098995 (-) // 100.0 //
Probeset : 1627452_a_at
Accessions : protein= NP_524529; /// NP_733209;, nucleotide= NM_079805; /// NM_170330;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic
Interpro : 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarit
FlyMine data for FBgn0002441.
TRiP has 2 RNAi stocks for FBgn0002441 available for purchase.
VDRC has 3 RNAi stocks for FBgn0002441 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	93 ± 3	4 of 4	1.40	Up
Head	54 ± 4	4 of 4	0.80	None
Eye	72 ± 6	4 of 4	1.09	None
Thoracicoabdominal ganglion	100 ± 2	4 of 4	1.50	Up
Salivary gland	133 ± 9	4 of 4	2.01	Up
Crop	165 ± 5	4 of 4	2.50	Up
Midgut	35 ± 1	4 of 4	0.50	Down
Tubule	99 ± 4	4 of 4	1.50	Up
Hindgut	98 ± 2	4 of 4	1.50	Up
Heart	56 ± 6	4 of 4	0.85	None
Fat body	54 ± 7	4 of 4	0.82	None
Ovary	169 ± 2	4 of 4	2.60	Up
Testis	97 ± 4	4 of 4	1.50	Up
Male accessory glands	57 ± 4	4 of 4	0.90	None
Virgin spermatheca	70 ± 5	4 of 4	1.06	None
Mated spermatheca	72 ± 1	4 of 4	1.10	None
Adult carcass	73 ± 8	4 of 4	1.10	None
Larval CNS	98 ± 4	4 of 4	1.49	Up
Larval Salivary gland	59 ± 0	4 of 4	0.90	None
Larval midgut	34 ± 0	4 of 4	0.52	Down
Larval tubule	38 ± 3	4 of 4	0.60	Down
Larval hindgut	53 ± 5	4 of 4	0.81	None
Larval fat body	41 ± 2	3 of 4	0.60	Down
Larval trachea	60 ± 8	4 of 4	0.91	None
Larval carcass	49 ± 5	4 of 4	0.74	None
S2 cells (growing)	128 ± 4	4 of 4	1.94	Up
Whole fly	66 ± 5	4 of 4

Looking for FBgn0002441. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720