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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0002567 through 18771 annotations produced 1 hits



lightoid (ltd):

Annotation Number : CG8024
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002567
Gbrowse : chr2R:5065368-5073866 (-) // 100.0 //
Probeset : 1632119_s_at
Accessions : protein= NP_525109; /// NP_724763; /// NP_724764; /// NP_724765; /// NP_724768;, nucleotide= NM_080370; /// NM_165658; /// NM_165659; /// NM_165660; /// NM_165663;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from seq
FlyMine data for FBgn0002567.
Homophila reports that CG8024 is a close match (3e-11) to human gene RRAS2;TC21 (NP_036382), a gene associated with Ovarian carcinoma (3).
TRiP has 2 RNAi stocks for FBgn0002567 available for purchase.
VDRC has 1 RNAi stocks for FBgn0002567 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain74 ± 44 of 4 0.20Down
Head1084 ± 324 of 4 2.60Up
Eye3750 ± 494 of 4 8.97Up
Thoracicoabdominal ganglion86 ± 74 of 4 0.20Down
Salivary gland214 ± 134 of 4 0.51Down
Crop115 ± 44 of 4 0.30Down
Midgut367 ± 124 of 4 0.90None
Tubule1773 ± 1494 of 4 4.20Up
Hindgut175 ± 84 of 4 0.40Down
Heart198 ± 64 of 4 0.47Down
Fat body207 ± 204 of 4 0.50Down
Ovary675 ± 164 of 4 1.60Up
Testis280 ± 144 of 4 0.70Down
Male accessory glands337 ± 84 of 4 0.80None
Virgin spermatheca157 ± 74 of 4 0.38Down
Mated spermatheca140 ± 64 of 4 0.34Down
Adult carcass200 ± 74 of 4 0.50Down
Larval CNS23 ± 14 of 4 0.06Down
Larval Salivary gland314 ± 324 of 4 0.75None
Larval midgut557 ± 424 of 4 1.33Up
Larval tubule1228 ± 464 of 4 2.90Up
Larval hindgut193 ± 194 of 4 0.46Down
Larval fat body2520 ± 2004 of 4 6.00Up
Larval trachea118 ± 1084 of 4 0.28Down
Larval carcass156 ± 284 of 4 0.37Down
S2 cells (growing)22 ± 14 of 4 0.05Down
Whole fly418 ± 304 of 4

Looking for FBgn0002567. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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