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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0002570 through 18771 annotations produced 1 hits



maltase (LvpH):

Annotation Number : CG8696
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002570
Gbrowse : chr2R:4337165-4339404 (-) // 100.0 //
Probeset : 1639401_at
Accessions : protein= NP_476627;, nucleotide= NM_057279;
Interpro : "0003824 // catalytic activity // inferred from electronic annotation /// 0004558 // alpha-glucosidase activity // infer
FlyMine data for FBgn0002570.
Homophila reports that CG8696 is a close match (1e-95) to human gene ATR1;D2H;NBAT;SLC3A1 (NP_000332), a gene associated with Cystinuria, 220100 (3);Homozygous 2p16 deletion syndrome, 606407 (3).
BioGrid reports that CG8696 interacts with CG9014 CG9506 .
VDRC has 3 RNAi stocks for FBgn0002570 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.00Down
Head35 84 of 4 0.00Down
Eye12 82 of 4 0.01Down
Thoracicoabdominal ganglion1 00 of 4 0.00Down
Salivary gland2 00 of 4 0.00Down
Crop6 21 of 4 0.00Down
Midgut6005 2144 of 4 6.10Up
Tubule5 10 of 4 0.00Down
Hindgut12 00 of 4 0.00Down
Heart2 10 of 4 0.00Down
Fat body1 20 of 4 0.00Down
Ovary2 10 of 4 0.00Down
Testis12 111 of 4 0.00Down
Male accessory glands2 10 of 4 0.00Down
Virgin spermatheca1 00 of 4 0.00Down
Mated spermatheca1 00 of 4 0.00Down
Adult carcass22 81 of 4 0.00Down
Larval CNS0 00 of 4 0.00Down
Larval Salivary gland0 00 of 4 0.00Down
Larval midgut1611 2434 of 4 1.62None
Larval tubule4 10 of 4 0.00Down
Larval hindgut5 10 of 4 0.01Down
Larval fat body1 00 of 4 0.00Down
Larval trachea1 10 of 4 0.00Down
Larval carcass0 00 of 4 0.00Down
S2 cells (growing)0 00 of 4 0.00Down
Whole fly992 874 of 4

Looking for FBgn0002570. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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