Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0002592 through 18771 annotations produced 1 hits



E(spl) region transcript m2 (m2):

Annotation Number : CG6104
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002592
Gbrowse : chr3R:21842234-21843192 (-) // 99.58 //
Probeset : 1637012_at
Accessions : protein= NP_524508;, nucleotide= NM_079784;
FlyMine data for FBgn0002592.
BDGP gene expression has embryonic in situ data for m2: 32 pix of staining in 18 body parts.
VDRC has 2 RNAi stocks for FBgn0002592 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 10 of 4 0.40Down
Head14 ± 14 of 4 1.10None
Eye30 ± 24 of 4 2.31Up
Thoracicoabdominal ganglion6 ± 20 of 4 0.50Down
Salivary gland11 ± 30 of 4 0.84None
Crop31 ± 44 of 4 2.30Up
Midgut21 ± 20 of 4 1.60Up
Tubule4 ± 00 of 4 0.30Down
Hindgut10 ± 10 of 4 0.80None
Heart5 ± 10 of 4 0.44Down
Fat body16 ± 70 of 4 1.25None
Ovary5 ± 11 of 4 0.40Down
Testis5 ± 00 of 4 0.40Down
Male accessory glands3 ± 20 of 4 0.30Down
Virgin spermatheca11 ± 11 of 4 0.83None
Mated spermatheca12 ± 30 of 4 0.92None
Adult carcass28 ± 22 of 4 2.20Up
Larval CNS62 ± 74 of 4 4.65Up
Larval Salivary gland20 ± 13 of 4 1.49Up
Larval midgut27 ± 12 of 4 2.04Up
Larval tubule8 ± 10 of 4 0.70Down
Larval hindgut31 ± 34 of 4 2.39Up
Larval fat body12 ± 32 of 4 0.90None
Larval trachea79 ± 104 of 4 5.92Up
Larval carcass58 ± 94 of 4 4.39Up
S2 cells (growing)7 ± 10 of 4 0.57Down
Whole fly13 ± 02 of 4

Looking for FBgn0002592. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime