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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0002723 through 18771 annotations produced 1 hits



methoprene-tolerant (Met):

Annotation Number : CG1705
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002723
Gbrowse : chrX:11510900-11513120 (+) // 100.0 //
Probeset : 1630521_at
Accessions : protein= NP_511126;, nucleotide= NM_078571;
Pathway : DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic ann
Interpro : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similari
FlyMine data for FBgn0002723.
BioGrid reports that CG1705 interacts with CG7765 CG8863 CG3665 .
TRiP has 1 RNAi stocks for FBgn0002723 available for purchase.
VDRC has 5 RNAi stocks for FBgn0002723 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain31 24 of 4 4.60Up
Head7 10 of 4 1.10None
Eye16 14 of 4 2.42Up
Thoracicoabdominal ganglion31 54 of 4 4.40Up
Salivary gland17 30 of 4 2.52None
Crop11 11 of 4 1.60None
Midgut5 10 of 4 0.80None
Tubule5 00 of 4 0.70Down
Hindgut16 22 of 4 2.40Up
Heart10 11 of 4 1.44None
Fat body16 42 of 4 2.39Up
Ovary10 11 of 4 1.40None
Testis5 11 of 4 0.80None
Male accessory glands8 20 of 4 1.30None
Virgin spermatheca5 10 of 4 0.77None
Mated spermatheca8 10 of 4 1.20None
Adult carcass14 10 of 4 2.00Up
Larval CNS15 04 of 4 2.18Up
Larval Salivary gland20 13 of 4 2.96Up
Larval midgut4 10 of 4 0.61None
Larval tubule8 03 of 4 1.20None
Larval hindgut6 10 of 4 0.93None
Larval fat body7 30 of 4 1.00None
Larval trachea12 42 of 4 1.72None
Larval carcass10 22 of 4 1.48None
S2 cells (growing)19 24 of 4 2.80Up
Whole fly7 11 of 4

Looking for FBgn0002723. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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