Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0002732 through 18771 annotations produced 1 hits



E(spl) region transcript malpha (malpha):

Annotation Number : CG8337
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002732
Gbrowse : chr3R:21836684-21837101 (+) // 100.0 //
Probeset : 1629601_at
Accessions : protein= NP_524506;, nucleotide= NM_079782;
FlyMine data for FBgn0002732.
BioGrid reports that CG8337 interacts with CG6099 CG6099 CG3936 .
VDRC has 3 RNAi stocks for FBgn0002732 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 00 of 4 0.20Down
Head4 ± 10 of 4 0.20Down
Eye3 ± 00 of 4 0.21Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.10Down
Salivary gland6 ± 11 of 4 0.35Down
Crop12 ± 30 of 4 0.70None
Midgut59 ± 14 of 4 3.20Up
Tubule10 ± 00 of 4 0.60Down
Hindgut10 ± 12 of 4 0.60Down
Heart2 ± 10 of 4 0.12Down
Fat body11 ± 30 of 4 0.61Down
Ovary7 ± 10 of 4 0.40Down
Testis3 ± 00 of 4 0.20Down
Male accessory glands3 ± 10 of 4 0.20Down
Virgin spermatheca8 ± 00 of 4 0.46Down
Mated spermatheca7 ± 10 of 4 0.39Down
Adult carcass10 ± 20 of 4 0.50Down
Larval CNS113 ± 184 of 4 6.02Up
Larval Salivary gland9 ± 10 of 4 0.52Down
Larval midgut33 ± 24 of 4 1.78Up
Larval tubule7 ± 00 of 4 0.40Down
Larval hindgut14 ± 21 of 4 0.77None
Larval fat body17 ± 31 of 4 0.90None
Larval trachea55 ± 64 of 4 2.94Up
Larval carcass45 ± 104 of 4 2.40None
S2 cells (growing)8 ± 10 of 4 0.46Down
Whole fly18 ± 24 of 4

Looking for FBgn0002732. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime