FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0002772 through 18771 annotations produced 1 hits

myosin light chain (Mlc1):

Annotation Number : CG5596
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002772
Gbrowse : chr3R:23483284-23485921 (-) // 100.0 //
Probeset : 1626446_a_at
Accessions : protein= NP_476639; /// NP_476640;, nucleotide= NM_057291; /// NM_057292;
Pathway : 0005859 // muscle myosin complex // inferred from direct assay /// 0005859 // muscle myosin complex // non-traceable aut
Interpro : "0000146 // microfilament motor activity // non-traceable author statement /// 0003774 // motor activity // inferred fro
FlyMine data for FBgn0002772.
BDGP gene expression has embryonic in situ data for Mlc1: 10 pix of staining in 6 body parts.
Homophila reports that CG5596 is a close match (1e-17) to human gene CMH8;MYL3 (NP_000249), a gene associated with Cardiomyopathy, familial hypertrophic, 8, 608751 (3).
BioGrid reports that CG5596 interacts with CG7393 CG8440 .
TRiP has 1 RNAi stocks for FBgn0002772 available for purchase.
VDRC has 1 RNAi stocks for FBgn0002772 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	58 ± 4	4 of 4	0.00	Down
Head	1224 ± 96	4 of 4	0.80	Down
Eye	216 ± 38	4 of 4	0.13	Down
Thoracicoabdominal ganglion	78 ± 17	4 of 4	0.00	Down
Salivary gland	37 ± 9	2 of 4	0.02	Down
Crop	5404 ± 330	4 of 4	3.30	Up
Midgut	1077 ± 43	4 of 4	0.70	Down
Tubule	88 ± 9	4 of 4	0.10	Down
Hindgut	3597 ± 100	4 of 4	2.20	Up
Heart	3818 ± 207	4 of 4	2.36	Up
Fat body	178 ± 57	4 of 4	0.11	Down
Ovary	70 ± 6	4 of 4	0.00	Down
Testis	276 ± 7	4 of 4	0.20	Down
Male accessory glands	1712 ± 68	4 of 4	1.10	None
Virgin spermatheca	150 ± 13	4 of 4	0.09	Down
Mated spermatheca	275 ± 34	4 of 4	0.17	Down
Adult carcass	3523 ± 245	4 of 4	2.20	Up
Larval CNS	33 ± 4	4 of 4	0.02	Down
Larval Salivary gland	118 ± 6	4 of 4	0.07	Down
Larval midgut	985 ± 14	4 of 4	0.61	Down
Larval tubule	86 ± 11	4 of 4	0.10	Down
Larval hindgut	3351 ± 61	4 of 4	2.07	Up
Larval fat body	14 ± 6	1 of 4	0.00	Down
Larval trachea	1127 ± 627	4 of 4	0.70	None
Larval carcass	4256 ± 429	4 of 4	2.63	Up
S2 cells (growing)	2 ± 0	0 of 4	0.00	Down
Whole fly	1617 ± 82	4 of 4

Looking for FBgn0002772. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720