FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0002985 through 18771 annotations produced 1 hits

Odd-skipped (odd):

Annotation Number : CG3851
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002985
Gbrowse : chr2L:3604221-3606748 (-) // 100.0 //
Probeset : 1625850_at
Accessions : protein= NP_722922;, nucleotide= NM_164546;
Pathway : DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II
Interpro : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or stru
FlyMine data for FBgn0002985.
BDGP gene expression has embryonic in situ data for odd: 80 pix of staining in 36 body parts.
Homophila reports that CG3851 is a close match (2e-11) to human gene BCD1;COPEB;KLF6;ZF9 (NP_001291), a gene associated with Gastric cancer, somatic, 137215 (3);Prostate cancer, somatic, 176807 (3).
BioGrid reports that CG3851 interacts with CG4276 CG4755 CG5555 CG5674 CG7417 CG7570 CG9572 .
TRiP has 2 RNAi stocks for FBgn0002985 available for purchase.
VDRC has 1 RNAi stocks for FBgn0002985 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	9 ± 1	2 of 4	0.20	Down
Head	10 ± 0	4 of 4	0.20	Down
Eye	15 ± 0	4 of 4	0.36	Down
Thoracicoabdominal ganglion	6 ± 1	0 of 4	0.20	Down
Salivary gland	6 ± 1	0 of 4	0.15	Down
Crop	7 ± 0	1 of 4	0.20	Down
Midgut	327 ± 9	4 of 4	7.70	Up
Tubule	35 ± 5	4 of 4	0.80	None
Hindgut	291 ± 11	4 of 4	6.80	Up
Heart	170 ± 6	4 of 4	3.99	Up
Fat body	10 ± 5	2 of 4	0.24	Down
Ovary	3 ± 1	0 of 4	0.10	Down
Testis	2 ± 0	0 of 4	0.10	Down
Male accessory glands	5 ± 1	0 of 4	0.10	Down
Virgin spermatheca	2 ± 1	0 of 4	0.06	Down
Mated spermatheca	4 ± 1	1 of 4	0.10	Down
Adult carcass	21 ± 2	3 of 4	0.50	Down
Larval CNS	20 ± 2	4 of 4	0.47	Down
Larval Salivary gland	5 ± 0	0 of 4	0.12	Down
Larval midgut	30 ± 4	4 of 4	0.71	Down
Larval tubule	85 ± 8	4 of 4	2.00	Up
Larval hindgut	271 ± 17	4 of 4	6.37	Up
Larval fat body	14 ± 1	3 of 4	0.30	Down
Larval trachea	18 ± 3	4 of 4	0.43	Down
Larval carcass	51 ± 1	4 of 4	1.21	Up
S2 cells (growing)	4 ± 0	1 of 4	0.11	Down
Whole fly	42 ± 2	4 of 4

Looking for FBgn0002985. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720