Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0003205 through 18771 annotations produced 1 hits


Ras GTPase (Ras85D):

Annotation Number : CG9375
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003205
Gbrowse : chr3R:5336272-5338786 (-) // 100.0 //
Probeset : 1624899_at
Accessions : protein= NP_476699;, nucleotide= NM_057351;
Pathway : open tracheal system // inferred from mutant phenotype /// 0007428 // primary branching
Interpro : open tracheal system // traceable author statement /// 0007455 // eye-antennal disc morphogenesis // inferred from muta
FlyMine data for FBgn0003205.
BDGP gene expression has embryonic in situ data for Ras85D: 8 pix of staining in 1 body parts.
Homophila reports that CG9375 is a close match (4e-12) to human gene RAC2 (NP_002863), a gene associated with Neutrophil immunodeficiency syndrome, 608203 (3).
BioGrid reports that CG9375 interacts with CG3166 CG3166 CG3166 CG3166 CG3166 CG3166 CG5942 CG9553 CG9554 CG9554 CG2534 CG3954 CG3954 CG3954 CG3954 CG3619 CG9885 CG12676 CG12676 CG7383 CG10488 CG4059 CG17610 CG17610 CG2275 CG3696 CG3696 CG8491 CG1689 CG1689 CG8118 CG8118 CG18740 CG7467 CG6824 CG2845 CG2845 CG2845 CG2845 CG2845 CG2845 CG2845 CG2845 CG17077 CG17077 CG17077 CG17077 CG17077 CG17077 CG17077 CG17077 CG17077 CG17077 CG3469 CG3469 CG3469 CG13388 CG5529 CG5529 CG8049 CG3126 CG4209 CG4654 CG15793 CG15793 CG15793 CG6376 CG10079 CG10079 CG10079 CG10079 CG10079 CG10079 CG10079 CG10079 CG10079 CG10079 CG6721 CG6721 CG18402 CG17342 CG15669 CG15669 CG31447 CG15162 CG4903 CG6818 CG3936 CG3936 CG11172 CG8318 CG4909 CG9856 CG9856 CG9856 CG9856 CG9842 CG9842 CG3180 CG3284 CG7471 CG4385 CG4385 CG4385 CG4385 CG4385 CG4385 CG4385 CG4385 CG4385 CG4385 CG4385 CG4385 CG10130 CG8815 CG7873 CG7873 CG7873 CG7873 CG7873 CG7873 CG7873 CG7873 CG7524 CG17603 CG17603 CG5444 CG5444 CG5444 CG5444 CG32211 CG32211 CG32211 CG7128 CG7128 CG5163 CG5163 CG6147 CG5123 CG5123 CG5123 CG5123 CG4531 CG4531 CG7508 CG3411 CG32134 CG32134 CG32435 CG5067 CG6556 CG6556 CG6556 CG6556 CG6556 CG6556 CG10798 CG3727 CG5605 CG9554 CG9554 CG1945 CG1945 CG7693 CG3874 CG6975 CG7672 CG7672 CG4637 CG7223 CG7223 CG7223 CG7223 CG2899 CG2899 CG2899 CG2899 CG8817 CG8817 CG8817 CG8817 CG33106 CG33106 CG16973 CG7109 CG7109 CG2845 CG2845 CG10108 CG10108 CG10108 CG8705 CG5403 CG6775 CG1004 CG9412 CG12559 CG12559 CG12559 CG12559 CG12559 CG12559 CG12559 CG12559 CG12559 CG12559 CG12559 CG12559 CG12559 CG12559 CG12559 CG12559 CG12559 CG12559 CG4319 CG4319 CG4319 CG4319 CG4336 CG18085 CG9936 CG4354 CG4494 CG18497 CG18497 CG18497 CG18497 CG18497 CG18497 CG10334 CG7847 CG1395 CG1395 CG31317 CG31317 CG31317 CG1921 CG1921 CG11502 CG11502 CG11502 CG11502 CG11502 CG11502 CG1389 CG1389 CG8651 CG1856 CG2956 CG6235 CG10491 CG4889 CG4889 CG4889 CG4889 CG4889 CG4889 CG31196 CG31196 CG31196 CG32179 CG32217 CG32217 CG32217 CG33261 .
TRiP has 3 RNAi stocks for FBgn0003205 available for purchase.
VDRC has 2 RNAi stocks for FBgn0003205 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1042 ± 274 of 4 2.50Up
Head521 ± 224 of 4 1.20Up
Eye277 ± 64 of 4 0.66Down
Thoracicoabdominal ganglion1200 ± 184 of 4 2.90Up
Salivary gland317 ± 64 of 4 0.76Down
Crop636 ± 174 of 4 1.50Up
Midgut456 ± 34 of 4 1.10Up
Tubule670 ± 94 of 4 1.60Up
Hindgut401 ± 44 of 4 1.00None
Heart515 ± 124 of 4 1.23Up
Fat body343 ± 364 of 4 0.82Down
Ovary813 ± 174 of 4 1.90Up
Testis123 ± 74 of 4 0.30Down
Male accessory glands235 ± 44 of 4 0.60Down
Virgin spermatheca367 ± 154 of 4 0.88Down
Mated spermatheca406 ± 34 of 4 0.97None
Adult carcass351 ± 84 of 4 0.80Down
Larval CNS1218 ± 514 of 4 2.91Up
Larval Salivary gland471 ± 54 of 4 1.12Up
Larval midgut784 ± 354 of 4 1.87Up
Larval tubule1161 ± 114 of 4 2.80Up
Larval hindgut705 ± 224 of 4 1.68Up
Larval fat body683 ± 584 of 4 1.60Up
Larval trachea826 ± 414 of 4 1.97Up
Larval carcass745 ± 334 of 4 1.78Up
S2 cells (growing)988 ± 74 of 4 2.36Up
Whole fly419 ± 94 of 4

Looking for FBgn0003205. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime