FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0003278 through 18771 annotations produced 1 hits

RNA polymerase I (RpI135):

Annotation Number : CG4033
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003278
Gbrowse : chr2L:404285-408049 (+) // 100.0 //
Probeset : 1627924_at
Accessions : protein= NP_476708;, nucleotide= NM_057360;
Pathway : 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0
Interpro : 0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inf
FlyMine data for FBgn0003278.
BDGP gene expression has embryonic in situ data for RpI135: 9 pix of staining in 17 body parts.
VDRC has 1 RNAi stocks for FBgn0003278 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	34 ± 1	4 of 4	0.40	Down
Head	29 ± 3	4 of 4	0.40	Down
Eye	25 ± 4	4 of 4	0.33	Down
Thoracicoabdominal ganglion	38 ± 2	4 of 4	0.50	Down
Salivary gland	49 ± 6	4 of 4	0.64	Down
Crop	43 ± 1	4 of 4	0.60	Down
Midgut	46 ± 2	4 of 4	0.60	Down
Tubule	40 ± 9	4 of 4	0.50	Down
Hindgut	29 ± 1	4 of 4	0.40	Down
Heart	28 ± 1	4 of 4	0.37	Down
Fat body	66 ± 3	4 of 4	0.85	None
Ovary	146 ± 4	4 of 4	1.90	Up
Testis	10 ± 0	4 of 4	0.10	Down
Male accessory glands	110 ± 4	4 of 4	1.40	Up
Virgin spermatheca	56 ± 1	4 of 4	0.73	Down
Mated spermatheca	97 ± 2	4 of 4	1.25	Up
Adult carcass	50 ± 3	4 of 4	0.60	Down
Larval CNS	119 ± 6	4 of 4	1.53	Up
Larval Salivary gland	65 ± 6	4 of 4	0.84	None
Larval midgut	45 ± 2	4 of 4	0.58	Down
Larval tubule	16 ± 1	4 of 4	0.20	Down
Larval hindgut	57 ± 3	4 of 4	0.74	Down
Larval fat body	20 ± 3	1 of 4	0.30	Down
Larval trachea	74 ± 7	4 of 4	0.95	None
Larval carcass	76 ± 18	4 of 4	0.98	None
S2 cells (growing)	164 ± 5	4 of 4	2.12	Up
Whole fly	77 ± 6	4 of 4

Looking for FBgn0003278. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720