FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0003285 through 18771 annotations produced 1 hits

roughest (rst):

Annotation Number : CG4125
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003285
Gbrowse : chrX:2846239-2867865 (-) // 100.0 //
Probeset : 1625366_at
Accessions : protein= NP_525058;, nucleotide= NM_080319;
Pathway : 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or str
FlyMine data for FBgn0003285.
BDGP gene expression has embryonic in situ data for rst: 38 pix of staining in 22 body parts.
Homophila reports that CG4125 is a close match (3e-12) to human gene ARMD1;FBLN6;FIBL6;HMCN1 (NP_114141), a gene associated with {Macular degeneration, age-related, 1}, 603075 (3).
BioGrid reports that CG4125 interacts with CG3619 CG15437 .
TRiP has 1 RNAi stocks for FBgn0003285 available for purchase.
VDRC has 3 RNAi stocks for FBgn0003285 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	82 ± 2	4 of 4	3.50	Up
Head	50 ± 1	4 of 4	2.10	Up
Eye	167 ± 10	4 of 4	7.07	Up
Thoracicoabdominal ganglion	90 ± 0	4 of 4	3.80	Up
Salivary gland	17 ± 4	1 of 4	0.73	None
Crop	10 ± 1	2 of 4	0.40	Down
Midgut	2 ± 0	0 of 4	0.10	Down
Tubule	15 ± 0	3 of 4	0.60	Down
Hindgut	32 ± 2	4 of 4	1.40	None
Heart	21 ± 0	4 of 4	0.91	None
Fat body	26 ± 4	4 of 4	1.13	None
Ovary	64 ± 7	4 of 4	2.70	Up
Testis	4 ± 0	0 of 4	0.20	Down
Male accessory glands	9 ± 1	1 of 4	0.40	Down
Virgin spermatheca	32 ± 5	4 of 4	1.37	None
Mated spermatheca	48 ± 9	4 of 4	2.04	None
Adult carcass	21 ± 2	2 of 4	0.90	None
Larval CNS	269 ± 20	4 of 4	11.41	Up
Larval Salivary gland	5 ± 1	0 of 4	0.22	Down
Larval midgut	1 ± 0	0 of 4	0.08	Down
Larval tubule	6 ± 1	2 of 4	0.30	Down
Larval hindgut	8 ± 1	3 of 4	0.35	Down
Larval fat body	7 ± 0	0 of 4	0.30	Down
Larval trachea	194 ± 32	4 of 4	8.23	Up
Larval carcass	93 ± 9	4 of 4	3.95	Up
S2 cells (growing)	0 ± 0	0 of 4	0.03	Down
Whole fly	23 ± 3	4 of 4

Looking for FBgn0003285. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720