FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0003313 through 18771 annotations produced 1 hits

spalt (sala):

Annotation Number : CG4922
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003313
Gbrowse : chr2L:11486188-11486955 (+) // 100.0 //
Probeset : 1638000_at
Accessions : protein= NP_523549;, nucleotide= NM_078825;
Pathway : 0005576 // extracellular region // inferred from electronic annotation
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0003313.
BDGP gene expression has embryonic in situ data for sala: 35 pix of staining in 43 body parts.
BioGrid reports that CG4922 interacts with CG5295 CG5094 CG7044 CG7188 CG8736 CG9572 CG9734 .
TRiP has 2 RNAi stocks for FBgn0003313 available for purchase.
VDRC has 3 RNAi stocks for FBgn0003313 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 2	0 of 4	0.10	None
Head	6 ± 2	0 of 4	0.10	None
Eye	2 ± 1	0 of 4	0.04	None
Thoracicoabdominal ganglion	7 ± 0	0 of 4	0.10	None
Salivary gland	11 ± 1	0 of 4	0.17	None
Crop	24 ± 2	4 of 4	0.40	None
Midgut	4 ± 1	0 of 4	0.10	None
Tubule	5 ± 1	0 of 4	0.10	Down
Hindgut	5 ± 1	0 of 4	0.10	None
Heart	2 ± 1	0 of 4	0.04	None
Fat body	20 ± 2	1 of 4	0.30	None
Ovary	2 ± 0	0 of 4	0.00	None
Testis	15 ± 1	4 of 4	0.20	None
Male accessory glands	11 ± 2	1 of 4	0.20	None
Virgin spermatheca	12 ± 1	3 of 4	0.18	None
Mated spermatheca	17 ± 3	3 of 4	0.25	None
Adult carcass	4 ± 2	0 of 4	0.10	None
Larval CNS	12 ± 3	4 of 4	0.18	None
Larval Salivary gland	9 ± 1	2 of 4	0.14	None
Larval midgut	6 ± 1	0 of 4	0.09	None
Larval tubule	9 ± 0	3 of 4	0.10	None
Larval hindgut	6 ± 0	0 of 4	0.09	None
Larval fat body	76 ± 2	4 of 4	1.10	None
Larval trachea	2 ± 1	0 of 4	0.03	None
Larval carcass	15 ± 1	4 of 4	0.22	None
S2 cells (growing)	4 ± 1	0 of 4	0.07	None
Whole fly	69 ± 21	4 of 4

Looking for FBgn0003313. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720