FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0003416 through 18771 annotations produced 1 hits

chrX:16244341-16250520 (+) // 100.0 // (phospholipase Cgamma):

Annotation Number : CG4200
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1628815_at
Accessions : protein= , nucleotide= NP_476726;
Pathway : 0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred
FlyMine data for full length.
Homophila reports that CG4200 is a close match (4e-37) to human gene KIAA1516;NPHS3;PLCE1 (NP_057425), a gene associated with Nephrotic syndrome, type 3, 610725 (3).
BioGrid reports that CG4200 interacts with CG4209 CG10079 CG6721 CG9842 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	149 ± 4	4 of 4	1.00	None
Head	108 ± 8	4 of 4	0.70	Down
Eye	104 ± 5	4 of 4	0.69	Down
Thoracicoabdominal ganglion	161 ± 5	4 of 4	1.10	None
Salivary gland	131 ± 4	4 of 4	0.86	None
Crop	226 ± 1	4 of 4	1.50	Up
Midgut	269 ± 5	4 of 4	1.80	Up
Tubule	296 ± 10	4 of 4	1.90	Up
Hindgut	210 ± 4	4 of 4	1.40	Up
Heart	135 ± 8	4 of 4	0.89	None
Fat body	96 ± 13	4 of 4	0.63	Down
Ovary	370 ± 1	4 of 4	2.40	Up
Testis	35 ± 1	4 of 4	0.20	Down
Male accessory glands	111 ± 5	4 of 4	0.70	Down
Virgin spermatheca	172 ± 11	4 of 4	1.13	None
Mated spermatheca	211 ± 9	4 of 4	1.39	Up
Adult carcass	69 ± 4	4 of 4	0.50	Down
Larval CNS	187 ± 11	4 of 4	1.23	Up
Larval Salivary gland	244 ± 5	4 of 4	1.60	Up
Larval midgut	279 ± 17	4 of 4	1.83	Up
Larval tubule	341 ± 7	4 of 4	2.20	Up
Larval hindgut	260 ± 6	4 of 4	1.71	Up
Larval fat body	137 ± 8	4 of 4	0.90	None
Larval trachea	311 ± 11	4 of 4	2.04	Up
Larval carcass	182 ± 7	4 of 4	1.20	Up
S2 cells (growing)	308 ± 3	4 of 4	2.02	Up
Whole fly	152 ± 8	4 of 4

Looking for FBgn0003416. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720