FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0003444 through 18771 annotations produced 1 hits

smoothened (smo):

Annotation Number : CG11561
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003444
Gbrowse : chr2L:277587-282167 (+) // 100.0 //
Probeset : 1634442_at
Accessions : protein= NP_523443;, nucleotide= NM_078719;
Pathway : imaginal disc // traceable author statement /// 0048100 // wing disc anterior/posterior pattern formation // traceable
Interpro : 0005768 // endosome // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0
FlyMine data for FBgn0003444.
BDGP gene expression has embryonic in situ data for smo: 37 pix of staining in 12 body parts.
Homophila reports that CG11561 is a close match (9e-38) to human gene EVR1;FZD4 (NP_036325), a gene associated with Exudative vitreoretinopathy, 133780 (3);Retinopathy of prematurity, 133780 (3).
BioGrid reports that CG11561 interacts with CG17493 CG2986 CG6998 CG9885 CG9554 CG2411 CG2411 CG2411 CG2411 CG2411 CG2411 CG3412 CG4889 CG1708 CG6551 CG1708 .
TRiP has 1 RNAi stocks for FBgn0003444 available for purchase.
VDRC has 1 RNAi stocks for FBgn0003444 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	83 ± 1	4 of 4	0.70	Down
Head	75 ± 5	4 of 4	0.60	Down
Eye	90 ± 2	4 of 4	0.78	Down
Thoracicoabdominal ganglion	77 ± 3	4 of 4	0.70	Down
Salivary gland	66 ± 7	4 of 4	0.57	Down
Crop	161 ± 8	4 of 4	1.40	Up
Midgut	53 ± 4	4 of 4	0.50	Down
Tubule	81 ± 2	4 of 4	0.70	Down
Hindgut	106 ± 3	4 of 4	0.90	None
Heart	141 ± 2	4 of 4	1.21	Up
Fat body	170 ± 22	4 of 4	1.46	Up
Ovary	340 ± 6	4 of 4	2.90	Up
Testis	24 ± 1	4 of 4	0.20	Down
Male accessory glands	70 ± 2	4 of 4	0.60	Down
Virgin spermatheca	145 ± 16	4 of 4	1.25	None
Mated spermatheca	168 ± 13	4 of 4	1.44	Up
Adult carcass	96 ± 7	4 of 4	0.80	None
Larval CNS	216 ± 10	4 of 4	1.85	Up
Larval Salivary gland	72 ± 7	4 of 4	0.62	Down
Larval midgut	62 ± 1	4 of 4	0.54	Down
Larval tubule	126 ± 3	4 of 4	1.10	None
Larval hindgut	130 ± 2	4 of 4	1.12	None
Larval fat body	92 ± 6	4 of 4	0.80	Down
Larval trachea	403 ± 4	4 of 4	3.46	Up
Larval carcass	159 ± 7	4 of 4	1.36	Up
S2 cells (growing)	177 ± 2	4 of 4	1.52	Up
Whole fly	116 ± 5	4 of 4

Looking for FBgn0003444. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720