FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0003507 through 18771 annotations produced 1 hits

March 2006 (FlyBase/BDGP 5.3) (chr3R:11819863-11829807 (+) // 100.0 //):

Annotation Number : CG3992
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : chr3-58
Gbrowse :
Probeset : 1629229_a_at
Accessions : protein= , nucleotide=
Interpro : "0001700 // embryonic development via the syncytial blastoderm // non-traceable author statement /// 0001706 // endoderm
FlyMine data for chr3-58.
Homophila reports that CG3992 is a close match (1e-13) to human gene ERYF1;GATA1;GF1;NFE1 (NP_002040), a gene associated with Dyserythropoietic anemia with thrombocytopenia, 300367 (3);Leukemia, megakaryoblastic, of Down syndrome, 190685 (3);Leukemia, megakaryoblastic, with or without Down syndrome, 190685 (3);Macrothrombocytopenia, 300367 (3).
BioGrid reports that CG3992 interacts with CG6147 CG12212 CG2762 CG2762 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	19 ± 2	4 of 4	0.10	Down
Head	247 ± 6	4 of 4	1.60	Up
Eye	70 ± 10	4 of 4	0.46	Down
Thoracicoabdominal ganglion	11 ± 0	4 of 4	0.10	Down
Salivary gland	10 ± 1	0 of 4	0.07	Down
Crop	9 ± 2	3 of 4	0.10	Down
Midgut	12 ± 1	4 of 4	0.10	Down
Tubule	8 ± 1	2 of 4	0.10	Down
Hindgut	19 ± 1	4 of 4	0.10	Down
Heart	651 ± 19	4 of 4	4.23	Up
Fat body	842 ± 22	4 of 4	5.47	Up
Ovary	201 ± 17	4 of 4	1.30	None
Testis	73 ± 4	4 of 4	0.50	Down
Male accessory glands	288 ± 27	4 of 4	1.90	Up
Virgin spermatheca	963 ± 84	4 of 4	6.26	Up
Mated spermatheca	775 ± 29	4 of 4	5.04	Up
Adult carcass	264 ± 12	4 of 4	1.70	Up
Larval CNS	2 ± 0	2 of 4	0.01	Down
Larval Salivary gland	20 ± 2	4 of 4	0.13	Down
Larval midgut	15 ± 2	4 of 4	0.10	Down
Larval tubule	53 ± 8	4 of 4	0.30	Down
Larval hindgut	20 ± 2	4 of 4	0.13	Down
Larval fat body	1373 ± 83	4 of 4	8.90	Up
Larval trachea	38 ± 6	4 of 4	0.25	Down
Larval carcass	97 ± 1	4 of 4	0.64	Down
S2 cells (growing)	955 ± 41	4 of 4	6.21	Up
Whole fly	154 ± 11	4 of 4

Looking for FBgn0003507. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720