FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0003511 through 18771 annotations produced 1 hits

serendipity beta (Sry-beta):

Annotation Number : CG7938
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003511
Gbrowse : chr3R:25865453-25866753 (+) // 100.0 //
Probeset : 1631325_at
Accessions : protein= NP_524579;, nucleotide= NM_079840;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay ///
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direc
FlyMine data for FBgn0003511.
BDGP gene expression has embryonic in situ data for Sry-beta: 40 pix of staining in 11 body parts.
Homophila reports that CG7938 is a close match (4e-11) to human gene SLUG;SNAI2;WS2D (NP_003059), a gene associated with Melanoma metastasis, modification of (1);Piebaldism, 172800 (3);Waardenburg syndrome, type IID, 608890 (3).
BioGrid reports that CG7938 interacts with CG8159 CG8553 CG9326 .
VDRC has 2 RNAi stocks for FBgn0003511 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	134 ± 5	4 of 4	1.50	Up
Head	71 ± 4	4 of 4	0.80	Down
Eye	72 ± 7	4 of 4	0.79	None
Thoracicoabdominal ganglion	86 ± 6	4 of 4	1.00	None
Salivary gland	24 ± 8	0 of 4	0.27	Down
Crop	68 ± 1	4 of 4	0.70	Down
Midgut	67 ± 3	4 of 4	0.70	Down
Tubule	48 ± 1	4 of 4	0.50	Down
Hindgut	45 ± 2	4 of 4	0.50	Down
Heart	37 ± 2	4 of 4	0.41	Down
Fat body	50 ± 7	0 of 4	0.55	Down
Ovary	190 ± 5	4 of 4	2.10	Up
Testis	59 ± 2	4 of 4	0.70	Down
Male accessory glands	58 ± 6	4 of 4	0.60	Down
Virgin spermatheca	51 ± 2	0 of 4	0.57	Down
Mated spermatheca	50 ± 4	2 of 4	0.55	Down
Adult carcass	47 ± 4	1 of 4	0.50	Down
Larval CNS	118 ± 10	4 of 4	1.30	Up
Larval Salivary gland	60 ± 3	4 of 4	0.66	Down
Larval midgut	36 ± 1	0 of 4	0.40	Down
Larval tubule	51 ± 5	4 of 4	0.60	Down
Larval hindgut	40 ± 1	2 of 4	0.45	Down
Larval fat body	55 ± 0	4 of 4	0.60	Down
Larval trachea	66 ± 7	4 of 4	0.73	Down
Larval carcass	38 ± 3	3 of 4	0.42	Down
S2 cells (growing)	77 ± 1	4 of 4	0.85	None
Whole fly	91 ± 4	4 of 4

Looking for FBgn0003511. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720