FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0003514 through 18771 annotations produced 1 hits

myosin II (sqh):

Annotation Number : CG3595
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003514
Gbrowse : chrX:6117093-6119196 (-) // 100.0 //
Probeset : 1624065_at
Accessions : protein= NP_511057;, nucleotide= NM_078502;
Pathway : open tracheal system // inferred from mutant phenotype /// 0035191 // nuclear axial expansion // inferred from mutant p
Interpro : 0005737 // cytoplasm // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation
FlyMine data for FBgn0003514.
BDGP gene expression has embryonic in situ data for sqh: 4 pix of staining in 1 body parts.
Homophila reports that CG3595 is a close match (3e-37) to human gene CMH10;MYL2 (NP_000423), a gene associated with Cardiomyopathy, familial hypertrophic, 10, 608758 (3);Cardiomyopathy, hypertrophic, mid-left ventricular chamber type, 608758 (3).
BioGrid reports that CG3595 interacts with CG7595 CG3510 CG18361 CG18361 CG17697 CG2248 CG2248 CG32555 CG32555 CG9774 .
TRiP has 4 RNAi stocks for FBgn0003514 available for purchase.
VDRC has 3 RNAi stocks for FBgn0003514 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	598 ± 10	4 of 4	1.00	None
Head	650 ± 64	4 of 4	1.10	None
Eye	1570 ± 26	4 of 4	2.69	Up
Thoracicoabdominal ganglion	451 ± 8	4 of 4	0.80	Down
Salivary gland	1355 ± 10	4 of 4	2.32	Up
Crop	1136 ± 18	4 of 4	1.90	Up
Midgut	1531 ± 37	4 of 4	2.60	Up
Tubule	707 ± 79	4 of 4	1.20	None
Hindgut	1390 ± 23	4 of 4	2.40	Up
Heart	798 ± 19	4 of 4	1.37	Up
Fat body	279 ± 36	4 of 4	0.48	Down
Ovary	460 ± 11	4 of 4	0.80	Down
Testis	374 ± 6	4 of 4	0.60	Down
Male accessory glands	1106 ± 56	4 of 4	1.90	Up
Virgin spermatheca	312 ± 13	4 of 4	0.53	Down
Mated spermatheca	400 ± 37	4 of 4	0.69	Down
Adult carcass	489 ± 30	4 of 4	0.80	None
Larval CNS	972 ± 78	4 of 4	1.67	Up
Larval Salivary gland	3927 ± 91	4 of 4	6.73	Up
Larval midgut	1661 ± 41	4 of 4	2.84	Up
Larval tubule	1503 ± 20	4 of 4	2.60	Up
Larval hindgut	1637 ± 57	4 of 4	2.80	Up
Larval fat body	880 ± 77	4 of 4	1.50	Up
Larval trachea	1994 ± 143	4 of 4	3.42	Up
Larval carcass	1289 ± 140	4 of 4	2.21	Up
S2 cells (growing)	2075 ± 24	4 of 4	3.55	Up
Whole fly	583 ± 28	4 of 4

Looking for FBgn0003514. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720