FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0003525 through 18771 annotations produced 1 hits

String (stg):

Annotation Number : CG1395
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003525
Gbrowse : chr3R:25077539-25081502 (-) // 100.0 //
Probeset : 1633174_at
Accessions : protein= NP_524547;, nucleotide= NM_079823;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay ///
Interpro : 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine ph
FlyMine data for FBgn0003525.
BDGP gene expression has embryonic in situ data for stg: 66 pix of staining in 6 body parts.
BioGrid reports that CG1395 interacts with CG32171 CG2652 CG7168 CG7172 CG9511 CG3166 CG11579 CG11579 CG2050 CG2050 CG9045 CG9045 CG9045 CG3978 CG3978 CG17077 CG9375 CG9375 CG4336 CG4336 CG4336 CG3938 CG3936 CG10895 CG5408 CG1856 CG32417 .
TRiP has 3 RNAi stocks for FBgn0003525 available for purchase.
VDRC has 1 RNAi stocks for FBgn0003525 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 1	3 of 4	0.00	Down
Head	13 ± 2	4 of 4	0.00	Down
Eye	5 ± 0	2 of 4	0.01	Down
Thoracicoabdominal ganglion	7 ± 1	1 of 4	0.00	Down
Salivary gland	13 ± 3	0 of 4	0.02	Down
Crop	11 ± 2	4 of 4	0.00	Down
Midgut	6 ± 0	3 of 4	0.00	Down
Tubule	9 ± 5	0 of 4	0.00	Down
Hindgut	7 ± 1	4 of 4	0.00	Down
Heart	25 ± 3	4 of 4	0.04	Down
Fat body	27 ± 12	4 of 4	0.04	Down
Ovary	1774 ± 36	4 of 4	2.90	Up
Testis	5 ± 0	3 of 4	0.00	Down
Male accessory glands	18 ± 3	3 of 4	0.00	Down
Virgin spermatheca	18 ± 2	3 of 4	0.03	Down
Mated spermatheca	17 ± 3	2 of 4	0.03	Down
Adult carcass	30 ± 4	3 of 4	0.00	Down
Larval CNS	852 ± 68	4 of 4	1.37	Up
Larval Salivary gland	16 ± 0	4 of 4	0.03	Down
Larval midgut	33 ± 5	4 of 4	0.05	Down
Larval tubule	10 ± 1	3 of 4	0.00	Down
Larval hindgut	47 ± 4	4 of 4	0.08	Down
Larval fat body	27 ± 2	4 of 4	0.00	Down
Larval trachea	284 ± 38	4 of 4	0.46	Down
Larval carcass	108 ± 3	4 of 4	0.17	Down
S2 cells (growing)	947 ± 29	4 of 4	1.53	Up
Whole fly	621 ± 27	4 of 4

Looking for FBgn0003525. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720