FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0003607 through 18771 annotations produced 1 hits

Heterochromatin Protein 1A (Su(var)205):

Annotation Number : CG8409
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003607
Gbrowse : chr2L:8209639-8211133 (-) // 100.0 //
Probeset : 1640689_a_at
Accessions : protein= NP_476755; /// NP_723361;, nucleotide= NM_057407; /// NM_164799;
Pathway : DNA-dependent // non-traceable author statement /// 0045893 // positive regulation of transcription
Interpro : DNA-dependent // traceable author statement /// 0051276 // chromosome organization // inferred from mutant phenotype 00
FlyMine data for FBgn0003607.
BDGP gene expression has embryonic in situ data for Su(var)205: 14 pix of staining in 10 body parts.
BioGrid reports that CG8409 interacts with CG9871 CG7776 CG18028 CG12559 CG12559 CG6476 CG6476 CG6476 CG6476 CG2759 CG2759 CG2759 CG2759 CG2759 CG2759 CG2759 CG2759 CG32491 .
TRiP has 2 RNAi stocks for FBgn0003607 available for purchase.
VDRC has 3 RNAi stocks for FBgn0003607 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	614 ± 9	4 of 4	1.00	None
Head	398 ± 8	4 of 4	0.70	Down
Eye	568 ± 14	4 of 4	0.95	None
Thoracicoabdominal ganglion	507 ± 22	4 of 4	0.80	Down
Salivary gland	487 ± 9	4 of 4	0.81	Down
Crop	412 ± 13	4 of 4	0.70	Down
Midgut	403 ± 7	4 of 4	0.70	Down
Tubule	405 ± 11	4 of 4	0.70	Down
Hindgut	439 ± 7	4 of 4	0.70	Down
Heart	293 ± 20	4 of 4	0.49	Down
Fat body	254 ± 28	4 of 4	0.42	Down
Ovary	1000 ± 4	4 of 4	1.70	Up
Testis	306 ± 4	4 of 4	0.50	Down
Male accessory glands	540 ± 29	4 of 4	0.90	None
Virgin spermatheca	433 ± 8	4 of 4	0.72	Down
Mated spermatheca	455 ± 17	4 of 4	0.76	Down
Adult carcass	287 ± 14	4 of 4	0.50	Down
Larval CNS	1634 ± 45	4 of 4	2.72	Up
Larval Salivary gland	652 ± 30	4 of 4	1.09	None
Larval midgut	331 ± 12	4 of 4	0.55	Down
Larval tubule	526 ± 21	4 of 4	0.90	None
Larval hindgut	500 ± 6	4 of 4	0.83	Down
Larval fat body	395 ± 17	4 of 4	0.70	Down
Larval trachea	736 ± 59	4 of 4	1.23	Up
Larval carcass	469 ± 17	4 of 4	0.78	Down
S2 cells (growing)	869 ± 14	4 of 4	1.45	Up
Whole fly	600 ± 24	4 of 4

Looking for FBgn0003607. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720